C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class I, type 8B, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104043 ATP8B4 9606 - 15:49858238-50182817 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000284509 ATP8B4-201 49858239-50119222 protein_coding
  ENST00000557955 ATP8B4-003 49859639-50119218 nonsense_mediated_decay
  ENST00000558024 ATP8B4-016 50009272-50047387 protein_coding
  ENST00000558203 ATP8B4-014 49860214-49879588 retained_intron
  ENST00000558458 ATP8B4-011 49920274-49931234 nonsense_mediated_decay
  ENST00000558498 ATP8B4-006 49858238-49876695 protein_coding
  ENST00000558829 ATP8B4-009 50047392-50182817 protein_coding
  ENST00000558906 ATP8B4-002 49859639-50119226 nonsense_mediated_decay
  ENST00000558959 ATP8B4-010 49979606-50044674 processed_transcript
  ENST00000559726 ATP8B4-007 49858239-50113316 nonsense_mediated_decay
  ENST00000559829 ATP8B4-001 49859000-50114504 protein_coding
  ENST00000559998 ATP8B4-012 49897435-49917276 retained_intron
  ENST00000560161 ATP8B4-017 49883159-49898221 processed_transcript
  ENST00000560354 ATP8B4-015 49860457-49876606 retained_intron
  ENST00000560437 ATP8B4-008 49987512-50119457 processed_transcript
  ENST00000560479 ATP8B4-005 49859002-49908093 protein_coding
  ENST00000561104 ATP8B4-013 49898146-49917270 retained_intron
  ENST00000561385 ATP8B4-004 49894892-49902283 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverMuscleOvaryPlacentaENST00000284509ENST00000557955ENST00000558203ENST00000558498ENST00000559726ENST00000559829ENST00000560479ENST00000561104
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Muscle Ovary Placenta
ENST00000284509 0.771±0.00 N/A N/A N/A 0.682±0.00 0.061±0.00 N/A N/A 0.340±0.00 N/A
ENST00000557955 N/A N/A N/A 0.582±0.00 1.111±0.00 N/A 0.558±0.00 N/A N/A N/A
ENST00000558203 N/A N/A N/A N/A N/A N/A N/A 0.266±0.00 N/A N/A
ENST00000558498 N/A 0.862±0.00 N/A 1.055±0.00 2.134±0.00 0.324±0.06 N/A N/A 0.582±0.05 1.739±0.16
ENST00000559726 N/A N/A N/A 0.291±0.00 N/A N/A 0.408±0.00 N/A N/A N/A
ENST00000559829 N/A N/A 0.222±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000560479 N/A N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A N/A
ENST00000561104 N/A N/A N/A N/A N/A N/A N/A 1.135±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0001 CGP 15:49858238-50236395

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005794 IDA Golgi apparatus
GO:0005886 IDA plasma membrane
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079453 ATP8B4 ATPase, class I, type 8B, member 4 protein_coding Danio_rerio
ENSMUSG00000060131 Atp8b4 ATPase, class I, type 8B, member 4 protein_coding Mus_musculus

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