C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ATPase, class I, type 8B, member 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000060131 Atp8b4 10090 - 2:126320973-126500674 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000040128 Atp8b4-001 126320973-126499847 protein_coding
  ENSMUST00000040149 Atp8b4-004 126322536-126491573 protein_coding
  ENSMUST00000129187 Atp8b4-005 126392817-126500674 protein_coding
  ENSMUST00000134977 Atp8b4-003 126371539-126491553 retained_intron
  ENSMUST00000147517 Atp8b4-002 126371585-126499989 nonsense_mediated_decay

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000040128ENSMUST00000040149ENSMUST00000129187ENSMUST00000134977ENSMUST00000147517
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000040128 0.363±0.00 0.133±0.05 N/A N/A N/A 0.090±0.05 0.092±0.05 0.457±0.17 0.517±0.50 0.328±0.00 0.027±0.01 0.219±0.05 0.047±0.02 0.127±0.11
ENSMUST00000040149 0.264±0.03 0.167±0.11 0.124±0.00 0.030±0.00 0.615±0.13 0.100±0.04 0.063±0.02 0.254±0.04 0.338±0.45 0.416±0.24 0.019±0.00 0.336±0.15 0.061±0.00 0.049±0.02
ENSMUST00000129187 N/A N/A N/A N/A 0.787±0.00 N/A N/A N/A N/A N/A 0.006±0.00 N/A N/A N/A
ENSMUST00000134977 N/A N/A N/A N/A N/A 0.092±0.01 N/A N/A N/A N/A 0.013±0.00 N/A 0.030±0.00 N/A
ENSMUST00000147517 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0002 CGP 2:126320973-126588243

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000287 IEA magnesium ion binding
GO:0003674 ND molecular_function
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0005794 IEA Golgi apparatus
GO:0005886 IEA plasma membrane
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079453 ATP8B4 ATPase, class I, type 8B, member 4 protein_coding Danio_rerio
ENSG00000104043 ATP8B4 ATPase, class I, type 8B, member 4 protein_coding Homo_sapiens

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