C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ATPase, class I, type 8B, member 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000557955 ATP8B4-003 ENSG00000104043 9606 - 15:49859639-50119218 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverENST00000557955
Transcript ID Breast Colon Liver
ENST00000557955 0.582±0.00 1.111±0.00 0.558±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E4 CIL_0002E4_0001 CGP 15:49858238-50236395

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0000287 IEA magnesium ion binding
GO:0004012 IEA phospholipid-translocating ATPase activity
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0015914 IEA phospholipid transport
GO:0016021 IEA integral component of membrane
GO:0019829 IEA cation-transporting ATPase activity
GO:0045332 IEA phospholipid translocation
GO:0046872 IEA metal ion binding
GO:0098655 IEA cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000134977 Atp8b4-003 retained_intron Mus_musculus 0 2311
ENSMUST00000040149 Atp8b4-004 protein_coding Mus_musculus 0 2311
ENSMUST00000040128 Atp8b4-001 protein_coding Mus_musculus 0 2311
ENSMUST00000129187 Atp8b4-005 protein_coding Mus_musculus 0 1410
ENSMUST00000147517 Atp8b4-002 nonsense_mediated_decay Mus_musculus 0 1408
ENSMUST00000107396 Atp8b2-201 protein_coding Mus_musculus 0 459
ENSMUST00000168276 Atp8b2-006 protein_coding Mus_musculus 0 459
ENSMUST00000166347 Atp8b2-002 retained_intron Mus_musculus 0 459
ENSMUST00000163354 Atp8b2-003 retained_intron Mus_musculus 0 459
ENSMUST00000069805 Atp8b2-001 protein_coding Mus_musculus 0 459
ENSMUST00000163152 Atp8b2-015 retained_intron Mus_musculus 0 333
ENSDART00000109548 atp8b5b-201 protein_coding Danio_rerio 0 233
ENSMUST00000171941 Atp8b2-014 protein_coding Mus_musculus 2e-30 139

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