C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NIPA-like domain containing 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104361 NIPAL2 9606 - 8:98189833-98294393 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000341166 NIPAL2-001 98189833-98294393 protein_coding
  ENST00000430223 NIPAL2-002 98189833-98294336 protein_coding
  ENST00000519324 NIPAL2-005 98252197-98294110 retained_intron
  ENST00000520545 NIPAL2-004 98192758-98251754 processed_transcript
  ENST00000520735 NIPAL2-008 98217203-98252601 processed_transcript
  ENST00000521820 NIPAL2-003 98195691-98205176 retained_intron
  ENST00000521949 NIPAL2-006 98231781-98236231 processed_transcript
  ENST00000522188 NIPAL2-007 98217025-98254068 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000341166ENST00000430223ENST00000519324ENST00000520545ENST00000520735
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000341166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A
ENST00000430223 2.352±0.00 2.211±0.00 0.220±0.00 1.431±0.11 2.211±0.67 1.726±0.02 0.934±0.78 1.111±0.60 1.017±0.05 2.222±0.00 0.149±0.00 3.421±1.66 2.367±0.78 3.154±0.76
ENST00000519324 N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520545 N/A N/A 0.834±0.00 N/A N/A N/A N/A N/A N/A 1.373±0.00 N/A 1.774±0.00 N/A N/A
ENST00000520735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008YL CIL_0008YL_0001 VISTA 8:98116253-98717204
CIL_0003C8 CIL_0003C8_0001 CGP 8:98117297-98294393

Gene Ontology
GO IDEvidence TypeGO Description
GO:0015095 IEA magnesium ion transmembrane transporter activity
GO:0015693 IEA magnesium ion transport
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076253 NIPAL2 (1 of 2) NIPA-like domain containing 2 protein_coding Danio_rerio
ENSDARG00000087903 NIPAL2 (2 of 2) NIPA-like domain containing 2 protein_coding Danio_rerio
ENSMUSG00000038879 Nipal2 NIPA-like domain containing 2 protein_coding Mus_musculus

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