C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003C8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104356-ENSG00000104361 CGP 9606 8:98117297-98294393
GeneTranscriptPositionBiotype
ENSG00000104356 (POP1)
processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae) 		ENST00000349693 (POP1-002) 98117840-98158412 protein_coding
ENST00000401707 (POP1-001) 98117312-98159834 protein_coding
ENST00000517435 (POP1-003) 98155958-98157667 retained_intron
ENST00000522319 (POP1-004) 98117297-98130040 protein_coding
ENSG00000104361 (NIPAL2)
NIPA-like domain containing 2 		ENST00000341166 (NIPAL2-001) 98189833-98294393 protein_coding
ENST00000430223 (NIPAL2-002) 98189833-98294336 protein_coding
ENST00000519324 (NIPAL2-005) 98252197-98294110 retained_intron
ENST00000520545 (NIPAL2-004) 98192758-98251754 processed_transcript
ENST00000520735 (NIPAL2-008) 98217203-98252601 processed_transcript
ENST00000521820 (NIPAL2-003) 98195691-98205176 retained_intron
ENST00000521949 (NIPAL2-006) 98231781-98236231 processed_transcript
ENST00000522188 (NIPAL2-007) 98217025-98254068 processed_transcript
CIL_0003C8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000022325-ENSMUSG00000038879 CGP 10090 15:34495304-34678706
GeneTranscriptPositionBiotype
ENSMUSG00000022325 (Pop1)
processing of precursor 1, ribonuclease P/MRP family, (S. cerevisiae) 		ENSMUST00000052290 (Pop1-001) 34495304-34530648 protein_coding
ENSMUST00000079028 (Pop1-002) 34495323-34530637 protein_coding
ENSMUST00000126223 (Pop1-003) 34509907-34512192 retained_intron
ENSMUST00000132427 (Pop1-005) 34515790-34529161 retained_intron
ENSMUST00000153061 (Pop1-006) 34526145-34529231 retained_intron
ENSMUST00000155073 (Pop1-004) 34514170-34518018 processed_transcript
ENSMUSG00000038879 (Nipal2)
NIPA-like domain containing 2 		ENSMUST00000040791 (Nipal2-201) 34572799-34678706 protein_coding
ENSMUSG00000084607 (Gm22208)
predicted gene, 22208 		ENSMUST00000122658 (Gm22208-201) 34531714-34531823 snRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003C8_0001ENSG00000104356ENST00000349693ENST00000401707ENST00000517435ENST00000522319ENSG00000104361ENST00000341166ENST00000430223ENST00000519324ENST00000520545ENST00000520735ENST00000521820ENST00000521949ENST00000522188CIL_0003C8_0002ENSMUSG00000022325ENSMUST00000052290ENSMUST00000079028ENSMUST00000126223ENSMUST00000132427ENSMUST00000153061ENSMUST00000155073ENSMUSG00000038879ENSMUST00000040791ENSMUSG00000084607ENSMUST00000122658
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003C8_0001ENSG00000104356ENST00000349693ENST00000401707ENST00000517435ENST00000522319ENSG00000104361ENST00000341166ENST00000430223ENST00000519324ENST00000520545ENST00000520735CIL_0003C8_0002ENSMUSG00000022325ENSMUST00000052290ENSMUST00000079028ENSMUST00000132427ENSMUST00000153061ENSMUSG00000038879ENSMUST00000040791ENSMUSG00000084607ENSMUST00000122658
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104356 ENST00000349693 0.350±0.00 0.842±0.00 0.487±0.00 N/A N/A 0.319±0.10 0.113±0.00 1.566±0.00 0.679±0.10 0.386±0.04 0.180±0.00 0.635±0.19 0.475±0.08 0.812±0.22
ENST00000401707 N/A 0.176±0.00 N/A 0.567±0.00 0.566±0.00 0.172±0.00 N/A N/A 0.116±0.00 N/A N/A 0.465±0.26 N/A 1.073±0.45
ENST00000517435 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.219±0.00 N/A N/A N/A
ENST00000522319 N/A N/A 1.766±0.00 N/A N/A N/A 0.359±0.00 N/A N/A 0.895±0.00 N/A N/A N/A N/A
ENSG00000104361 ENST00000341166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 N/A
ENST00000430223 2.352±0.00 2.211±0.00 0.220±0.00 1.431±0.11 2.211±0.67 1.726±0.02 0.934±0.78 1.111±0.60 1.017±0.05 2.222±0.00 0.149±0.00 3.421±1.66 2.367±0.78 3.154±0.76
ENST00000519324 N/A N/A N/A N/A N/A N/A N/A 0.680±0.00 N/A N/A N/A N/A N/A N/A
ENST00000520545 N/A N/A 0.834±0.00 N/A N/A N/A N/A N/A N/A 1.373±0.00 N/A 1.774±0.00 N/A N/A
ENST00000520735 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.295±0.00 N/A N/A N/A
ENST00000521820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000521949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000522188 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000022325 ENSMUST00000052290 N/A N/A N/A 0.222±0.00 0.418±0.00 N/A 0.135±0.07 N/A 0.283±0.00 0.160±0.00 0.241±0.09 N/A 0.469±0.00 N/A
ENSMUST00000079028 0.940±0.28 0.393±0.08 1.148±0.05 2.502±1.56 0.546±0.22 0.644±0.23 0.446±0.07 0.807±0.36 3.261±2.42 0.538±0.11 0.867±0.12 1.826±1.03 3.348±1.99 0.676±0.16
ENSMUST00000126223 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.857±0.00 N/A N/A 0.593±0.00
ENSMUST00000153061 2.355±0.02 0.828±0.00 N/A N/A N/A N/A 0.821±0.00 N/A N/A N/A N/A 3.318±1.02 N/A N/A
ENSMUST00000155073 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000038879 ENSMUST00000040791 0.761±0.62 1.965±0.64 3.135±1.14 1.109±0.19 2.972±1.08 6.383±0.24 0.140±0.03 1.290±0.24 0.104±0.05 5.994±0.72 0.040±0.01 1.597±0.66 0.269±0.14 0.270±0.15
ENSMUSG00000084607 ENSMUST00000122658 3920.490±0.00 N/A N/A N/A 2774.520±0.00 N/A N/A 4896.420±2449.70 27.324±3.07 2466.680±0.00 N/A 29.463±0.00 N/A N/A

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