C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, C2HC-type containing 1A
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000104427 ZC2HC1A 9606 + 8:78666047-78719765 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263849 ZC2HC1A-001 78666047-78719765 protein_coding
  ENST00000519307 ZC2HC1A-004 78697406-78717502 protein_coding
  ENST00000521176 ZC2HC1A-003 78666129-78697505 processed_transcript
  ENST00000521873 ZC2HC1A-002 78666089-78679390 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263849ENST00000519307ENST00000521176ENST00000521873
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263849 1.533±0.00 1.543±0.00 0.846±0.00 3.731±1.17 0.908±0.30 2.276±0.75 0.869±0.29 0.765±0.55 2.939±0.00 2.253±0.42 0.736±0.00 2.240±1.60 1.500±0.29 3.041±0.04
ENST00000519307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A N/A
ENST00000521176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.842±0.00
ENST00000521873 N/A N/A 0.686±0.00 N/A 1.466±0.00 N/A 0.449±0.00 N/A N/A N/A 0.577±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002P2 CIL_0002P2_0001 CGP 8:78516139-78719765
CIL_0002P0 CIL_0002P0_0001 CGP 8:78666047-78805523

Gene Ontology
GO IDEvidence TypeGO Description
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000027915 zc2hc1a zinc finger, C2HC-type containing 1A protein_coding Danio_rerio
ENSMUSG00000043542 Zc2hc1a zinc finger, C2HC-type containing 1A protein_coding Mus_musculus

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