C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002P2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000171033-ENSG00000104427 CGP 9606 8:78516139-78719765
GeneTranscriptPositionBiotype
ENSG00000104427 (ZC2HC1A)
zinc finger, C2HC-type containing 1A 		ENST00000263849 (ZC2HC1A-001) 78666047-78719765 protein_coding
ENST00000519307 (ZC2HC1A-004) 78697406-78717502 protein_coding
ENST00000521176 (ZC2HC1A-003) 78666129-78697505 processed_transcript
ENST00000521873 (ZC2HC1A-002) 78666089-78679390 retained_intron
ENSG00000104432 (IL7)
interleukin 7 		ENST00000263851 (IL7-001) 78732772-78805523 protein_coding
ENST00000379113 (IL7-201) 78732774-78805523 protein_coding
ENST00000518982 (IL7-002) 78733048-78805464 nonsense_mediated_decay
ENST00000519833 (IL7-008) 78717900-78740082 processed_transcript
ENST00000520215 (IL7-005) 78733665-78804928 nonsense_mediated_decay
ENST00000520269 (IL7-004) 78733665-78804928 protein_coding
ENST00000520317 (IL7-006) 78733665-78805451 nonsense_mediated_decay
ENST00000521323 (IL7-003) 78797834-78805120 retained_intron
ENST00000523959 (IL7-007) 78675743-78738570 processed_transcript
ENST00000541183 (IL7-202) 78732774-78805523 protein_coding
ENSG00000171033 (PKIA)
protein kinase (cAMP-dependent, catalytic) inhibitor alpha 		ENST00000352966 (PKIA-002) 78516355-78603185 protein_coding
ENST00000396418 (PKIA-001) 78516139-78605267 protein_coding
ENST00000518467 (PKIA-003) 78591231-78602098 protein_coding
ENSG00000254266 (RP11-594N15.2)
 ENST00000519242 (RP11-594N15.2-002) 78535026-78558497 lincRNA
ENST00000522302 (RP11-594N15.2-001) 78533892-78558503 lincRNA
ENST00000522807 (RP11-594N15.2-003) 78426103-78558493 lincRNA
ENSG00000260398 (RP11-594N15.3)
 ENST00000565862 (RP11-594N15.3-001) 78605952-78609705 sense_overlapping
CIL_0002P2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027499-ENSMUSG00000043542 CGP 10090 3:7366604-7553848
GeneTranscriptPositionBiotype
ENSMUSG00000027499 (Pkia)
protein kinase inhibitor, alpha 		ENSMUST00000028999 (Pkia-201) 7366604-7445366 protein_coding
ENSMUSG00000043542 (Zc2hc1a)
zinc finger, C2HC-type containing 1A 		ENSMUST00000051064 (Zc2hc1a-201) 7503426-7553848 protein_coding
ENSMUSG00000088484 (Gm23592)
predicted gene, 23592 		ENSMUST00000157859 (Gm23592-201) 7501904-7502020 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002P2_0001ENSG00000104427ENST00000263849ENST00000519307ENST00000521176ENST00000521873ENSG00000104432ENST00000263851ENST00000379113ENST00000518982ENST00000519833ENST00000520215ENST00000520269ENST00000520317ENST00000521323ENST00000523959ENST00000541183ENSG00000171033ENST00000352966ENST00000396418ENST00000518467ENSG00000254266ENST00000519242ENST00000522302ENST00000522807ENSG00000260398ENST00000565862CIL_0002P2_0002ENSMUSG00000027499ENSMUST00000028999ENSMUSG00000043542ENSMUST00000051064ENSMUSG00000088484ENSMUST00000157859
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002P2_0001ENSG00000104427ENST00000263849ENST00000519307ENST00000521176ENST00000521873ENSG00000104432ENST00000263851ENST00000379113ENST00000520215ENST00000520317ENSG00000171033ENST00000352966ENST00000396418ENST00000518467ENSG00000254266ENST00000519242ENST00000522302ENST00000522807ENSG00000260398ENST00000565862CIL_0002P2_0002ENSMUSG00000027499ENSMUST00000028999ENSMUSG00000043542ENSMUST00000051064ENSMUSG00000088484ENSMUST00000157859
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104427 ENST00000263849 1.533±0.00 1.543±0.00 0.846±0.00 3.731±1.17 0.908±0.30 2.276±0.75 0.869±0.29 0.765±0.55 2.939±0.00 2.253±0.42 0.736±0.00 2.240±1.60 1.500±0.29 3.041±0.04
ENST00000519307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A N/A
ENST00000521176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.842±0.00
ENST00000521873 N/A N/A 0.686±0.00 N/A 1.466±0.00 N/A 0.449±0.00 N/A N/A N/A 0.577±0.00 N/A N/A N/A
ENSG00000104432 ENST00000263851 N/A 2.494±0.00 N/A N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.391±0.00
ENST00000379113 N/A N/A N/A N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.201±0.00 0.192±0.00 N/A N/A
ENST00000518982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.277±0.00
ENST00000520269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520317 N/A N/A N/A N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A
ENST00000521323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000171033 ENST00000352966 N/A 0.359±0.00 0.201±0.00 13.821±0.00 0.605±0.00 0.807±0.18 14.542±1.86 1.526±0.00 1.424±1.38 1.799±0.00 61.967±0.00 0.530±0.38 0.438±0.13 0.345±0.00
ENST00000396418 N/A 0.404±0.00 0.384±0.00 9.380±0.92 0.551±0.02 0.224±0.04 9.848±3.92 0.554±0.00 0.016±0.00 1.084±0.06 32.910±0.00 0.384±0.29 0.302±0.04 0.216±0.08
ENST00000518467 0.111±0.00 N/A N/A N/A N/A N/A N/A N/A 0.063±0.00 1.528±0.00 N/A 2.343±0.00 N/A 1.744±0.00
ENSG00000254266 ENST00000519242 N/A N/A 0.266±0.00 0.044±0.00 0.063±0.00 N/A 0.083±0.07 N/A N/A N/A N/A 0.034±0.00 N/A N/A
ENST00000522302 N/A 0.005±0.00 N/A 0.063±0.05 0.044±0.00 N/A N/A 0.024±0.00 N/A N/A N/A 0.035±0.02 N/A 0.434±0.09
ENST00000522807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A
ENSG00000260398 ENST00000565862 0.005±0.00 0.075±0.00 N/A 0.627±0.05 0.138±0.05 0.069±0.05 4.377±0.00 0.044±0.00 0.538±0.00 0.380±0.22 2.652±1.19 0.027±0.01 0.032±0.01 0.018±0.01
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000027499 ENSMUST00000028999 3.246±1.32 0.915±0.49 4.356±0.14 44.346±21.28 2.715±1.20 2.133±0.29 14.414±3.50 5.441±1.04 0.321±0.17 4.922±0.57 48.381±52.83 4.872±2.27 0.555±0.50 0.328±0.15
ENSMUSG00000043542 ENSMUST00000051064 4.737±0.29 1.515±0.31 8.358±0.55 18.095±8.34 3.115±0.42 1.882±0.28 2.505±0.33 3.449±0.39 0.885±0.56 7.569±0.81 1.597±0.26 4.973±1.35 2.683±0.77 1.200±0.54
ENSMUSG00000088484 ENSMUST00000157859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1191.954±1176.85

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