C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002P0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000104427-ENSG00000104432 CGP 9606 8:78666047-78805523
GeneTranscriptPositionBiotype
ENSG00000104427 (ZC2HC1A)
zinc finger, C2HC-type containing 1A 		ENST00000263849 (ZC2HC1A-001) 78666047-78719765 protein_coding
ENST00000519307 (ZC2HC1A-004) 78697406-78717502 protein_coding
ENST00000521176 (ZC2HC1A-003) 78666129-78697505 processed_transcript
ENST00000521873 (ZC2HC1A-002) 78666089-78679390 retained_intron
ENSG00000104432 (IL7)
interleukin 7 		ENST00000263851 (IL7-001) 78732772-78805523 protein_coding
ENST00000379113 (IL7-201) 78732774-78805523 protein_coding
ENST00000518982 (IL7-002) 78733048-78805464 nonsense_mediated_decay
ENST00000519833 (IL7-008) 78717900-78740082 processed_transcript
ENST00000520215 (IL7-005) 78733665-78804928 nonsense_mediated_decay
ENST00000520269 (IL7-004) 78733665-78804928 protein_coding
ENST00000520317 (IL7-006) 78733665-78805451 nonsense_mediated_decay
ENST00000521323 (IL7-003) 78797834-78805120 retained_intron
ENST00000523959 (IL7-007) 78675743-78738570 processed_transcript
ENST00000541183 (IL7-202) 78732774-78805523 protein_coding
ENSG00000253919 (PRKRIRP7)
protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor) pseudogene 7 		ENST00000520248 (PRKRIRP7-001) 78760142-78762431 processed_pseudogene
ENSG00000254352 (RP11-578O24.2)
 ENST00000520351 (RP11-578O24.2-001) 78723796-78724136 processed_pseudogene
CIL_0002P0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043542-ENSMUSG00000040329 CGP 10090 3:7503426-7613427
GeneTranscriptPositionBiotype
ENSMUSG00000040329 (Il7)
interleukin 7 		ENSMUST00000168269 (Il7-201) 7572077-7613427 protein_coding
ENSMUSG00000043542 (Zc2hc1a)
zinc finger, C2HC-type containing 1A 		ENSMUST00000051064 (Zc2hc1a-201) 7503426-7553848 protein_coding
ENSMUSG00000097804 (Gm16685)
predicted gene, 16685 		ENSMUST00000181286 (Gm16685-201) 7612705-7690001 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002P0_0001ENSG00000104427ENST00000263849ENST00000519307ENST00000521176ENST00000521873ENSG00000104432ENST00000263851ENST00000379113ENST00000518982ENST00000519833ENST00000520215ENST00000520269ENST00000520317ENST00000521323ENST00000523959ENST00000541183ENSG00000253919ENST00000520248ENSG00000254352ENST00000520351CIL_0002P0_0002ENSMUSG00000040329ENSMUST00000168269ENSMUSG00000043542ENSMUST00000051064ENSMUSG00000097804ENSMUST00000181286
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002P0_0001ENSG00000104427ENST00000263849ENST00000519307ENST00000521176ENST00000521873ENSG00000104432ENST00000263851ENST00000379113ENST00000520215ENST00000520317ENSG00000253919ENST00000520248ENSG00000254352ENST00000520351CIL_0002P0_0002ENSMUSG00000040329ENSMUST00000168269ENSMUSG00000043542ENSMUST00000051064ENSMUSG00000097804ENSMUST00000181286
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000104427 ENST00000263849 1.533±0.00 1.543±0.00 0.846±0.00 3.731±1.17 0.908±0.30 2.276±0.75 0.869±0.29 0.765±0.55 2.939±0.00 2.253±0.42 0.736±0.00 2.240±1.60 1.500±0.29 3.041±0.04
ENST00000519307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.513±0.00 N/A N/A N/A
ENST00000521176 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 9.842±0.00
ENST00000521873 N/A N/A 0.686±0.00 N/A 1.466±0.00 N/A 0.449±0.00 N/A N/A N/A 0.577±0.00 N/A N/A N/A
ENSG00000104432 ENST00000263851 N/A 2.494±0.00 N/A N/A 0.665±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.391±0.00
ENST00000379113 N/A N/A N/A N/A N/A N/A N/A 1.115±0.00 N/A N/A 0.201±0.00 0.192±0.00 N/A N/A
ENST00000518982 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000519833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520215 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 4.277±0.00
ENST00000520269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000520317 N/A N/A N/A N/A N/A N/A N/A N/A 0.516±0.00 N/A N/A N/A N/A N/A
ENST00000521323 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000523959 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541183 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000253919 ENST00000520248 N/A 0.009±0.00 0.266±0.00 0.080±0.00 0.138±0.12 0.370±0.00 0.025±0.00 0.201±0.18 0.135±0.00 0.929±0.00 N/A 0.008±0.00 N/A 0.026±0.00
ENSG00000254352 ENST00000520351 N/A 1.003±0.00 N/A 1.586±0.99 1.138±0.52 2.536±0.00 2.280±0.00 0.859±0.00 1.007±0.89 2.183±1.88 N/A 0.378±0.17 N/A 0.285±0.25
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000040329 ENSMUST00000168269 0.693±0.17 1.069±0.34 0.885±0.20 0.022±0.01 1.634±0.82 1.698±0.56 0.156±0.04 0.506±0.18 0.254±0.11 1.190±0.26 0.052±0.03 0.910±0.40 0.027±0.01 0.025±0.01
ENSMUSG00000043542 ENSMUST00000051064 4.737±0.29 1.515±0.31 8.358±0.55 18.095±8.34 3.115±0.42 1.882±0.28 2.505±0.33 3.449±0.39 0.885±0.56 7.569±0.81 1.597±0.26 4.973±1.35 2.683±0.77 1.200±0.54
ENSMUSG00000097804 ENSMUST00000181286 0.163±0.11 N/A 0.061±0.01 0.043±0.02 0.893±0.53 0.491±0.26 0.100±0.06 0.582±0.17 0.048±0.03 0.353±0.03 0.095±0.07 0.185±0.20 0.014±0.01 0.069±0.05

Loading