C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: olfactomedin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105088 OLFM2 9606 - 19:9853718-9936552 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264833 OLFM2-001 9853718-9936552 protein_coding
  ENST00000590410 OLFM2-004 9857208-9936324 retained_intron
  ENST00000590841 OLFM2-002 9853745-9858168 protein_coding
  ENST00000592448 OLFM2-003 9854551-9858146 nonsense_mediated_decay
  ENST00000593091 OLFM2-005 9854616-9913836 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000264833ENST00000590410ENST00000590841ENST00000593091
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000264833 17.374±0.00 5.003±0.00 N/A 23.008±18.64 22.593±22.28 1.853±0.00 0.817±0.00 0.222±0.00 2.791±1.93 2.569±1.47 N/A 9.506±8.51 8.414±0.68 9.041±1.61
ENST00000590410 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.297±0.00 0.124±0.00 N/A N/A
ENST00000590841 N/A 2.483±0.00 0.661±0.00 2.762±0.00 N/A 1.655±1.53 N/A 0.899±0.00 3.447±0.00 N/A 0.416±0.00 2.280±0.00 N/A 2.814±0.00
ENST00000593091 N/A N/A N/A N/A 0.260±0.00 N/A N/A 0.469±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EY CIL_0005EY_0001 CGP 19:9835257-9936552
CIL_000784 CIL_000784_0001 CGP 19:9853718-10010471

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0009306 IDA protein secretion
GO:0030054 IEA cell junction
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000007015 olfm2b olfactomedin 2b protein_coding Danio_rerio
ENSDARG00000077847 olfm2a olfactomedin 2a protein_coding Danio_rerio
ENSMUSG00000032172 Olfm2 olfactomedin 2 protein_coding Mus_musculus

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