C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: olfactomedin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264833 OLFM2-001 ENSG00000105088 9606 - 19:9853718-9936552 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000264833
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000264833 17.374±0.00 5.003±0.00 23.008±18.64 22.593±22.28 1.853±0.00 0.817±0.00 0.222±0.00 2.791±1.93 2.569±1.47 9.506±8.51 8.414±0.68 9.041±1.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005EY CIL_0005EY_0001 CGP 19:9835257-9936552
CIL_000784 CIL_000784_0001 CGP 19:9853718-10010471

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005576 IDA extracellular region
GO:0009306 IDA protein secretion
GO:0030054 IEA cell junction
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex
GO:0045202 IEA synapse

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034692 Olfm2-201 protein_coding Mus_musculus 0 1570
ENSDART00000154542 olfm2a-201 protein_coding Danio_rerio 0 536
ENSDART00000109894 olfm2a-001 protein_coding Danio_rerio 0 536

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