C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: fibrillarin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105202 FBL 9606 - 19:39834458-39846414 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000221801 FBL-001 39834458-39846414 protein_coding
  ENST00000593503 FBL-007 39834460-39838091 processed_transcript
  ENST00000594309 FBL-012 39839035-39846357 protein_coding
  ENST00000594443 FBL-003 39834503-39846370 nonsense_mediated_decay
  ENST00000595545 FBL-009 39834458-39840441 protein_coding
  ENST00000597224 FBL-006 39834691-39840722 protein_coding
  ENST00000597634 FBL-005 39836556-39846342 protein_coding
  ENST00000598417 FBL-011 39837820-39846347 protein_coding
  ENST00000599134 FBL-010 39839074-39846329 protein_coding
  ENST00000599159 FBL-002 39838260-39846376 retained_intron
  ENST00000601274 FBL-004 39834717-39846357 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221801ENST00000593503ENST00000597224ENST00000597634ENST00000598417ENST00000599159ENST00000601274
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221801 35.509±0.00 74.223±0.00 N/A 19.348±0.00 31.725±28.91 44.552±41.52 9.142±0.00 29.176±0.00 7.900±6.54 60.594±0.00 28.621±0.00 142.789±128.40 10.773±0.00 88.068±0.00
ENST00000593503 N/A N/A N/A N/A N/A 3.228±0.00 1.150±0.00 3.058±0.00 N/A 3.152±0.00 4.325±0.00 N/A N/A 24.803±0.00
ENST00000597224 29.843±0.00 46.988±0.00 N/A 4.451±3.34 N/A 56.569±0.00 10.380±0.00 14.992±0.00 15.083±0.00 45.800±0.00 20.680±0.00 78.599±0.00 47.418±0.00 N/A
ENST00000597634 37.769±0.00 N/A N/A 8.410±0.00 35.768±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598417 48.681±0.00 N/A 1.070±0.00 11.749±0.00 N/A N/A N/A N/A 1.391±0.00 N/A N/A N/A N/A N/A
ENST00000599159 N/A N/A N/A 0.332±0.00 1.027±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000601274 N/A N/A N/A N/A N/A N/A N/A 14.715±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0001652 IEA granular component
GO:0003723 IEA:TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0015030 IDA Cajal body
GO:0016020 IDA membrane
GO:0016074 IEA snoRNA metabolic process
GO:0016429 IEA tRNA (adenine-N1-)-methyltransferase activity
GO:0030488 IEA tRNA methylation
GO:0031428 NAS box C/D snoRNP complex
GO:0031515 IEA tRNA (m1A) methyltransferase complex
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome
GO:1990258 IDA histone glutamine methylation
GO:1990259 IDA histone-glutamine methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000053912 fbl fibrillarin protein_coding Danio_rerio
ENSMUSG00000046865 Fbl fibrillarin protein_coding Mus_musculus

Loading