C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillarin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000597224 FBL-006 ENSG00000105202 9606 - 19:39834691-39840722 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000597224
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000597224 29.843±0.00 46.988±0.00 4.451±3.34 56.569±0.00 10.380±0.00 14.992±0.00 15.083±0.00 45.800±0.00 20.680±0.00 78.599±0.00 47.418±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0006364 IEA rRNA processing
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0016429 IEA tRNA (adenine-N1-)-methyltransferase activity
GO:0030488 IEA tRNA methylation
GO:0031515 IEA tRNA (m1A) methyltransferase complex
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042405 Fbl-201 protein_coding Mus_musculus 0 896
ENSMUST00000061073 Gm5812-001 processed_pseudogene Mus_musculus 0 891
ENSMUST00000151732 Tulp4-012 processed_transcript Mus_musculus 0 797
ENSMUST00000167849 Gm6211-001 transcribed_processed_pseudogene Mus_musculus 0 784
ENSMUST00000147973 Gm6211-002 processed_transcript Mus_musculus 0 784
ENSMUST00000141059 Tulp4-007 retained_intron Mus_musculus 0 291
ENSMUST00000144124 Tulp4-011 processed_transcript Mus_musculus 1e-30 137
ENSMUST00000145340 Tulp4-006 processed_transcript Mus_musculus 1e-30 137
ENSMUST00000126982 Tulp4-009 processed_transcript Mus_musculus 1e-30 137
ENSMUST00000146758 Tulp4-003 processed_transcript Mus_musculus 1e-30 137
ENSMUST00000149838 Tulp4-004 processed_transcript Mus_musculus 1e-30 137

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