C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: fibrillarin
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000221801 FBL-001 ENSG00000105202 9606 - 19:39834458-39846414 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000221801
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000221801 35.509±0.00 74.223±0.00 19.348±0.00 31.725±28.91 44.552±41.52 9.142±0.00 29.176±0.00 7.900±6.54 60.594±0.00 28.621±0.00 142.789±128.40 10.773±0.00 88.068±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001649 IDA osteoblast differentiation
GO:0001652 IEA granular component
GO:0003723 IEA:TAS RNA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005730 IDA nucleolus
GO:0006364 IEA rRNA processing
GO:0008033 IEA tRNA processing
GO:0008168 IEA methyltransferase activity
GO:0015030 IDA Cajal body
GO:0016020 IDA membrane
GO:0016074 IEA snoRNA metabolic process
GO:0031428 NAS box C/D snoRNP complex
GO:0032259 IEA methylation
GO:0044822 IDA poly(A) RNA binding
GO:0070062 IDA extracellular vesicular exosome
GO:1990258 IDA histone glutamine methylation
GO:1990259 IDA histone-glutamine methyltransferase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042405 Fbl-201 protein_coding Mus_musculus 0 1112
ENSMUST00000061073 Gm5812-001 processed_pseudogene Mus_musculus 0 1022
ENSMUST00000147973 Gm6211-002 processed_transcript Mus_musculus 0 902
ENSMUST00000151732 Tulp4-012 processed_transcript Mus_musculus 0 867
ENSMUST00000167849 Gm6211-001 transcribed_processed_pseudogene Mus_musculus 0 843
ENSMUST00000141059 Tulp4-007 retained_intron Mus_musculus 0 366
ENSMUST00000144124 Tulp4-011 processed_transcript Mus_musculus 0 207
ENSMUST00000145340 Tulp4-006 processed_transcript Mus_musculus 0 207
ENSMUST00000126982 Tulp4-009 processed_transcript Mus_musculus 0 207
ENSMUST00000146758 Tulp4-003 processed_transcript Mus_musculus 0 207
ENSMUST00000149838 Tulp4-004 processed_transcript Mus_musculus 0 207

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