C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0005QQ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000071683-ENSDARG00000071678 CGP 7955 22:4697499-4757835
GeneTranscriptPositionBiotype
ENSDARG00000071678 (atcaya)
ataxia, cerebellar, Cayman type a 		ENSDART00000083474 (atcaya-201) 4750745-4757833 protein_coding
ENSDART00000138967 (atcaya-001) 4747962-4757835 protein_coding
ENSDARG00000071683 (zfr2)
zinc finger RNA binding protein 2 		ENSDART00000122341 (zfr2-001) 4697499-4741035 protein_coding
ENSDART00000144889 (zfr2-002) 4701096-4704132 retained_intron
CIL_0005QQ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000105278-ENSG00000167654 CGP 9606 19:3804024-3928079
GeneTranscriptPositionBiotype
ENSG00000105278 (ZFR2)
zinc finger RNA binding protein 2 		ENST00000262961 (ZFR2-003) 3804024-3869028 protein_coding
ENST00000438164 (ZFR2-002) 3821427-3869028 nonsense_mediated_decay
ENST00000439086 (ZFR2-004) 3851813-3869032 protein_coding
ENST00000586578 (ZFR2-001) 3851805-3869015 nonsense_mediated_decay
ENST00000587212 (ZFR2-007) 3833720-3869029 nonsense_mediated_decay
ENST00000591712 (ZFR2-008) 3852440-3855590 protein_coding
ENST00000591965 (ZFR2-006) 3831501-3869029 processed_transcript
ENST00000592398 (ZFR2-009) 3852362-3869023 protein_coding
ENST00000592807 (ZFR2-005) 3833541-3869029 retained_intron
ENSG00000167654 (ATCAY)
ataxia, cerebellar, Cayman type 		ENST00000450849 (ATCAY-001) 3880583-3928079 protein_coding
ENST00000595916 (ATCAY-006) 3880685-3893669 processed_transcript
ENST00000597739 (ATCAY-002) 3880685-3924997 nonsense_mediated_decay
ENST00000598136 (ATCAY-005) 3879864-3905595 protein_coding
ENST00000600960 (ATCAY-004) 3885768-3926316 protein_coding
ENST00000601323 (ATCAY-009) 3925283-3926316 processed_transcript
ENSG00000266627 (RN7SL202P)
RNA, 7SL, cytoplasmic 202, pseudogene 		ENST00000584410 (RN7SL202P-201) 3920245-3920506 misc_RNA
ENSG00000266989 (FTLP5)
ferritin, light polypeptide pseudogene 5 		ENST00000586853 (FTLP5-001) 3870991-3872107 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QQ_0001ENSDARG00000071678ENSDART00000083474ENSDART00000138967ENSDARG00000071683ENSDART00000122341ENSDART00000144889CIL_0005QQ_0002ENSG00000105278ENST00000262961ENST00000438164ENST00000439086ENST00000586578ENST00000587212ENST00000591712ENST00000591965ENST00000592398ENST00000592807ENSG00000167654ENST00000450849ENST00000595916ENST00000597739ENST00000598136ENST00000600960ENST00000601323ENSG00000266627ENST00000584410ENSG00000266989ENST00000586853
Region; Gene Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0005QQ_0001ENSDARG00000071678ENSDART00000083474ENSDART00000138967ENSDARG00000071683ENSDART00000122341CIL_0005QQ_0002ENSG00000105278ENST00000262961ENST00000439086ENST00000586578ENST00000591712ENST00000592807ENSG00000167654ENST00000450849ENST00000597739ENST00000600960ENST00000601323ENSG00000266627ENST00000584410ENSG00000266989ENST00000586853
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000071678 ENSDART00000083474 N/A N/A 51.496±10.68 N/A N/A 3.788±0.62 1.162±0.57 N/A N/A N/A N/A N/A N/A
ENSDART00000138967 N/A N/A 32.191±3.01 N/A N/A 0.817±0.12 N/A N/A N/A 1.244±0.00 N/A N/A N/A
ENSDARG00000071683 ENSDART00000122341 N/A N/A 9.532±3.41 N/A N/A 6.035±3.57 4.484±0.36 3.601±0.00 N/A 10.219±0.00 N/A N/A N/A
ENSDART00000144889 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000105278 ENST00000262961 0.058±0.00 N/A 0.809±0.00 0.042±0.00 N/A N/A 0.041±0.00 N/A N/A 0.033±0.00 N/A N/A N/A
ENST00000438164 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439086 N/A 0.292±0.00 0.921±0.01 N/A N/A 0.100±0.00 N/A N/A N/A N/A 0.221±0.00 N/A 2.611±0.00
ENST00000586578 N/A N/A 0.976±0.00 N/A 0.254±0.00 N/A N/A N/A N/A N/A N/A N/A 2.711±0.00
ENST00000587212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000591712 N/A N/A N/A 0.236±0.00 N/A N/A 0.075±0.00 0.128±0.00 N/A 0.366±0.00 0.168±0.00 N/A 5.851±0.00
ENST00000591965 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592398 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592807 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A
ENSG00000167654 ENST00000450849 0.067±0.00 0.244±0.00 14.284±0.00 0.068±0.02 0.141±0.11 0.113±0.00 0.198±0.00 0.060±0.03 0.125±0.00 0.019±0.00 0.031±0.02 0.031±0.00 0.442±0.00
ENST00000595916 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000597739 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.317±0.00 N/A 0.024±0.00 N/A
ENST00000598136 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000600960 0.032±0.00 0.132±0.00 6.124±0.00 0.133±0.00 0.016±0.00 0.067±0.00 N/A 0.025±0.00 0.091±0.05 0.116±0.00 N/A N/A 0.088±0.00
ENST00000601323 N/A N/A N/A 0.220±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000266627 ENST00000584410 0.605±0.00 0.393±0.00 0.533±0.00 0.243±0.00 N/A N/A 0.411±0.00 N/A 0.237±0.00 0.362±0.00 1.294±0.00 0.145±0.00 0.438±0.00
ENSG00000266989 ENST00000586853 0.130±0.00 0.047±0.00 0.055±0.00 0.209±0.00 0.093±0.00 0.130±0.00 0.502±0.00 0.174±0.00 0.290±0.00 0.081±0.00 0.063±0.00 N/A N/A

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