C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105364 MRPL4 9606 + 19:10251901-10260045 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000253099 MRPL4-001 10251967-10260045 protein_coding
  ENST00000307422 MRPL4-201 10251964-10260043 protein_coding
  ENST00000393733 MRPL4-003 10252227-10260025 protein_coding
  ENST00000588502 MRPL4-010 10252276-10258623 protein_coding
  ENST00000588963 MRPL4-005 10252305-10253029 retained_intron
  ENST00000590150 MRPL4-009 10251998-10258234 protein_coding
  ENST00000590669 MRPL4-002 10252010-10259125 protein_coding
  ENST00000590702 MRPL4-008 10254620-10259042 protein_coding
  ENST00000591054 MRPL4-007 10251944-10258667 nonsense_mediated_decay
  ENST00000592071 MRPL4-004 10252258-10255717 retained_intron
  ENST00000592514 MRPL4-006 10251901-10259778 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000253099ENST00000307422ENST00000588502ENST00000590669ENST00000592514
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000253099 N/A N/A 3.084±0.00 N/A 2.804±0.00 N/A 6.469±0.00 N/A N/A N/A 21.619±0.00 N/A
ENST00000307422 N/A N/A N/A 12.194±0.00 N/A 12.272±0.00 N/A 29.826±0.00 14.059±0.00 33.145±0.00 23.001±1.87 13.945±0.00
ENST00000588502 N/A 5.114±0.00 N/A N/A 2.738±0.00 N/A N/A N/A N/A 6.248±0.00 N/A N/A
ENST00000590669 N/A N/A 2.642±0.00 N/A N/A N/A N/A N/A 3.191±0.00 N/A N/A N/A
ENST00000592514 17.892±0.00 N/A 14.604±9.29 10.407±5.80 18.351±0.00 9.666±5.31 30.974±0.00 N/A 6.816±0.00 38.064±9.05 19.772±0.00 13.466±3.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00039H CIL_00039H_0001 CGP 19:10223844-10260045
CIL_0004G9 CIL_0004G9_0001 CGP 19:10251901-10286615

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005739 IEA mitochondrion
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000058824 zgmrpl4 mitochondrial ribosomal protein L4 protein_coding Danio_rerio
ENSMUSG00000003299 Mrpl4 mitochondrial ribosomal protein L4 protein_coding Mus_musculus

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