C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Bet1 golgi vesicular membrane trafficking protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000105829 BET1 9606 - 7:93962762-94004382 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222547 BET1-001 93993242-94004375 protein_coding
  ENST00000357520 BET1-005 93962762-94004355 nonsense_mediated_decay
  ENST00000424151 BET1-007 93965410-93968390 processed_transcript
  ENST00000425626 BET1-004 93996031-94004382 protein_coding
  ENST00000433727 BET1-002 93993260-94004361 protein_coding
  ENST00000457139 BET1-003 93993273-93999719 protein_coding
  ENST00000471446 BET1-006 93972383-93996321 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222547ENST00000357520ENST00000425626ENST00000433727ENST00000457139ENST00000471446
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222547 3.632±0.00 2.618±0.00 1.117±0.00 2.793±0.53 4.424±2.46 5.044±0.00 1.663±1.09 6.066±2.79 4.313±0.40 4.038±0.00 0.409±0.00 7.600±1.55 8.022±2.30 5.164±1.03
ENST00000357520 N/A 0.508±0.00 N/A 0.313±0.00 N/A 0.334±0.00 N/A N/A N/A 0.615±0.00 0.096±0.06 N/A 0.485±0.00 N/A
ENST00000425626 N/A N/A 1.036±0.00 N/A 2.615±0.00 3.310±0.00 N/A N/A 2.721±0.00 N/A N/A N/A N/A N/A
ENST00000433727 1.296±0.00 1.672±0.00 N/A N/A 2.481±0.00 2.030±0.00 1.029±0.00 2.699±0.47 N/A 1.739±0.00 0.296±0.00 3.817±0.50 3.091±1.72 1.700±0.62
ENST00000457139 N/A N/A N/A 1.555±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471446 N/A N/A 2.838±0.00 N/A N/A N/A N/A N/A N/A N/A 2.564±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E1 CIL_0006E1_0001 CGP 7:93921699-94004382
CIL_0006DY CIL_0006DY_0001 CGP 7:93962762-94431232

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019905 IEA syntaxin binding
GO:0031985 IEA Golgi cisterna
GO:0048280 IEA vesicle fusion with Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000034885 bet1 blocked early in transport 1 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000032757 Bet1 blocked early in transport 1 homolog (S. cerevisiae) protein_coding Mus_musculus

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