C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Bet1 golgi vesicular membrane trafficking protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222547 BET1-001 ENSG00000105829 9606 - 7:93993242-94004375 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000222547
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000222547 3.632±0.00 2.618±0.00 1.117±0.00 2.793±0.53 4.424±2.46 5.044±0.00 1.663±1.09 6.066±2.79 4.313±0.40 4.038±0.00 0.409±0.00 7.600±1.55 8.022±2.30 5.164±1.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006E1 CIL_0006E1_0001 CGP 7:93921699-94004382
CIL_0006DY CIL_0006DY_0001 CGP 7:93962762-94431232

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000139 IEA Golgi membrane
GO:0005515 IPI:IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0005801 IEA cis-Golgi network
GO:0006888 IEA ER to Golgi vesicle-mediated transport
GO:0015031 IEA protein transport
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0019905 IEA syntaxin binding
GO:0031985 IEA Golgi cisterna
GO:0048280 IEA vesicle fusion with Golgi apparatus

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000049166 Bet1-001 protein_coding Mus_musculus 0 608
ENSMUST00000150319 Bet1-002 retained_intron Mus_musculus 0 278
ENSMUST00000145696 Bet1-003 processed_transcript Mus_musculus 0 255

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