| Transcript ID | Brain | Lung | Ovary |
|---|---|---|---|
| ENST00000222728 | 0.136±0.00 | 2.277±0.00 | 1.559±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | homeobox A6 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000106006  |
HOXA6 | 9606 | - |
7:27145396-27150603  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000222728 |
HOXA6-001 | 27145396-27147774 | protein_coding | ||
| ENST00000521478 |
HOXA6-002 | 27145662-27150603 | processed_transcript | ||
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0007OD | CIL_0007OD_0002 | UCNEbase | 7:26506344-27606703 |
| CIL_0008QL | CIL_0008QL_0001 | VISTA | 7:26816432-27417045 |
| CIL_000911 | CIL_000911_0001 | VISTA | 7:26910239-27511438 |
| CIL_000811 | CIL_000811_0001 | VISTA | 7:26948649-27549872 |
| CIL_00097P | CIL_00097P_0001 | VISTA | 7:27075631-27678581 |
| CIL_0003PC | CIL_0003PC_0001 | CGP | 7:27141052-27150603 |
| CIL_0003P9 | CIL_0003P9_0001 | CGP | 7:27145396-27157936 |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0003677 | IEA | DNA binding |
| GO:0003700 | IEA | sequence-specific DNA binding transcription factor activity |
| GO:0005634 | IEA | nucleus |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0009952 | IEA | anterior/posterior pattern specification |
| GO:0043565 | IEA | sequence-specific DNA binding |
| GO:0048704 | IEA | embryonic skeletal system morphogenesis |
| GO:0048706 | IEA | embryonic skeletal system development |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Description | Biotype | Species | |
|
ENSMUSG00000043219
|
Hoxa6 | homeobox A6 | protein_coding | Mus_musculus | |
