C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0003PC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000106004-ENSG00000106006 CGP 9606 7:27141052-27150603
GeneTranscriptPositionBiotype
ENSG00000106004 (HOXA5)
homeobox A5
ENST00000222726 (HOXA5-001) 27141052-27143668 protein_coding
ENST00000520854 (HOXA5-002) 27141807-27142775 processed_transcript
ENSG00000106006 (HOXA6)
homeobox A6
ENST00000222728 (HOXA6-001) 27145396-27147774 protein_coding
ENST00000521478 (HOXA6-002) 27145662-27150603 processed_transcript
CIL_0003PC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038253-ENSMUSG00000043219 CGP 10090 6:52201754-52208722
GeneTranscriptPositionBiotype
ENSMUSG00000038253 (Hoxa5)
homeobox A5
ENSMUST00000048794 (Hoxa5-001) 52201754-52204587 protein_coding
ENSMUSG00000043219 (Hoxa6)
homeobox A6
ENSMUST00000062829 (Hoxa6-001) 52206288-52208722 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PC_0001ENSG00000106004ENST00000222726ENST00000520854ENSG00000106006ENST00000222728ENST00000521478CIL_0003PC_0002ENSMUSG00000038253ENSMUST00000048794ENSMUSG00000043219ENSMUST00000062829
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003PC_0001ENSG00000106004ENST00000222726ENST00000520854ENSG00000106006ENST00000222728CIL_0003PC_0002ENSMUSG00000038253ENSMUST00000048794ENSMUSG00000043219ENSMUST00000062829
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106004 ENST00000222726 1.234±0.00 5.326±0.00 2.457±0.00 N/A 4.078±2.23 4.910±1.21 0.044±0.00 5.781±5.74 1.093±0.97 7.167±2.77 1.834±0.31 1.766±1.43 0.189±0.08 1.783±1.43
ENST00000520854 N/A N/A N/A N/A N/A N/A N/A N/A 0.320±0.00 11.205±0.00 2.308±0.00 1.561±0.65 0.702±0.62 0.776±0.00
ENSG00000106006 ENST00000222728 N/A N/A N/A 0.136±0.00 N/A N/A N/A N/A N/A 2.277±0.00 N/A 1.559±0.00 N/A N/A
ENST00000521478 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038253 ENSMUST00000048794 2.141±1.00 6.396±3.91 2.667±1.02 8.376±6.15 2.514±1.15 7.121±0.96 0.464±0.18 3.878±0.82 0.466±0.42 20.336±5.61 0.922±0.17 7.019±3.48 0.247±0.13 0.084±0.05
ENSMUSG00000043219 ENSMUST00000062829 N/A 1.335±0.59 0.959±0.00 0.563±0.53 0.847±0.50 3.711±0.25 0.106±0.00 1.024±0.00 0.044±0.03 0.645±0.20 0.494±0.06 2.562±0.99 0.185±0.06 0.145±0.12

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