C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Tax1 (human T-cell leukemia virus type I) binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000396319 TAX1BP1-002 ENSG00000106052 9606 + 7:27740189-27829263 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000396319
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000396319 7.254±0.00 3.982±0.00 2.346±0.00 10.004±4.52 4.447±0.80 7.971±5.26 11.853±9.08 12.588±10.71 4.778±2.68 10.434±6.55 9.923±7.60 9.505±0.28 9.830±2.43 18.355±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZJ CIL_0003ZJ_0001 CGP 7:27525442-27844564
CIL_0003ZI CIL_0003ZI_0001 CGP 7:27739331-28180743

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0006915 IEA apoptotic process
GO:0019900 ISS kinase binding
GO:0032088 ISS negative regulation of NF-kappaB transcription factor activity
GO:0032480 TAS negative regulation of type I interferon production
GO:0043066 IEA negative regulation of apoptotic process
GO:0045087 TAS innate immune response

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000080723 Tax1bp1-001 protein_coding Mus_musculus 0 2089
ENSMUST00000138040 Tax1bp1-004 protein_coding Mus_musculus 0 784
ENSMUST00000149588 Tax1bp1-003 protein_coding Mus_musculus 0 749
ENSMUST00000128173 Tax1bp1-002 processed_transcript Mus_musculus 0 710
ENSMUST00000129660 Tax1bp1-005 protein_coding Mus_musculus 0 418
ENSMUST00000147513 Tax1bp1-006 processed_transcript Mus_musculus 0 366
ENSMUST00000149586 Tax1bp1-007 retained_intron Mus_musculus 0 243

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