C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chimerin 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106069 CHN2 9606 + 7:29122274-29514328 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000222792 CHN2-001 29194412-29514328 protein_coding
  ENST00000409041 CHN2-201 29480111-29514327 protein_coding
  ENST00000409350 CHN2-009 29194925-29400735 protein_coding
  ENST00000409922 CHN2-008 29288881-29400781 processed_transcript
  ENST00000409964 CHN2-013 29197925-29400600 processed_transcript
  ENST00000410098 CHN2-004 29483816-29512740 processed_transcript
  ENST00000412536 CHN2-015 29334505-29400696 processed_transcript
  ENST00000412711 CHN2-002 29479712-29514328 retained_intron
  ENST00000421775 CHN2-202 29480111-29512735 protein_coding
  ENST00000423511 CHN2-020 29128021-29146695 protein_coding
  ENST00000424025 CHN2-203 29480111-29514327 protein_coding
  ENST00000433720 CHN2-005 29504795-29509681 protein_coding
  ENST00000435288 CHN2-204 29194505-29514327 protein_coding
  ENST00000439384 CHN2-010 29146569-29400590 protein_coding
  ENST00000439711 CHN2-205 29480111-29512735 protein_coding
  ENST00000443025 CHN2-022 29125033-29128172 processed_transcript
  ENST00000446446 CHN2-018 29400700-29507303 protein_coding
  ENST00000461824 CHN2-012 29146589-29148657 processed_transcript
  ENST00000467441 CHN2-007 29479946-29507301 processed_transcript
  ENST00000470261 CHN2-011 29146632-29147304 retained_intron
  ENST00000474070 CHN2-017 29146597-29480356 nonsense_mediated_decay
  ENST00000478128 CHN2-016 29334508-29400617 processed_transcript
  ENST00000482820 CHN2-014 29334518-29398485 processed_transcript
  ENST00000483081 CHN2-019 29335707-29367971 processed_transcript
  ENST00000491856 CHN2-003 29396648-29401281 retained_intron
  ENST00000493906 CHN2-006 29480011-29504820 processed_transcript
  ENST00000495789 CHN2-206 29194942-29512735 protein_coding
  ENST00000539389 CHN2-207 29194942-29512735 protein_coding
  ENST00000539406 CHN2-208 29194942-29512735 protein_coding
  ENST00000578605 CHN2-021 29122453-29146223 processed_transcript
  ENST00000582692 CHN2-023 29122274-29126579 processed_transcript
  ENST00000588769 CHN2-024 29125055-29128167 processed_transcript
  ENST00000606897 CHN2-025 29124982-29128150 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonKidneyLiverMuscleOvaryPlacentaENST00000222792ENST00000409041ENST00000412711ENST00000470261
Transcript ID Brain Breast Colon Kidney Liver Muscle Ovary Placenta
ENST00000222792 2.988±0.00 0.969±0.12 N/A 3.491±0.00 8.137±0.00 N/A N/A 9.152±0.00
ENST00000409041 4.422±1.02 N/A 2.872±0.04 N/A 3.382±0.00 N/A N/A N/A
ENST00000412711 2.262±0.00 N/A N/A N/A N/A N/A 9.323±0.00 N/A
ENST00000470261 N/A N/A N/A N/A N/A 2.793±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZN CIL_0003ZN_0001 CGP 7:28995231-29514328
CIL_0003ZM CIL_0003ZM_0001 CGP 7:29122274-29567295

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046872 IEA metal ion binding
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000011845 chn2 chimerin (chimaerin) 2 protein_coding Danio_rerio
ENSMUSG00000004633 Chn2 chimerin 2 protein_coding Mus_musculus

Loading