C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chimerin 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000222792 CHN2-001 ENSG00000106069 9606 + 7:29194412-29514328 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastKidneyLiverPlacentaENST00000222792
Transcript ID Brain Breast Kidney Liver Placenta
ENST00000222792 2.988±0.00 0.969±0.12 3.491±0.00 8.137±0.00 9.152±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZN CIL_0003ZN_0001 CGP 7:28995231-29514328
CIL_0003ZM CIL_0003ZM_0001 CGP 7:29122274-29567295

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005070 TAS SH3/SH2 adaptor activity
GO:0005096 IEA GTPase activator activity
GO:0005515 IPI protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0009967 TAS positive regulation of signal transduction
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0046872 IEA metal ion binding
GO:0051056 TAS regulation of small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000046856 Chn2-001 protein_coding Mus_musculus 0 2414
ENSMUST00000067741 Chn2-003 protein_coding Mus_musculus 0 1513
ENSMUST00000114401 Chn2-005 protein_coding Mus_musculus 0 1179
ENSMUST00000146114 Chn2-004 protein_coding Mus_musculus 0 1177
ENSMUST00000114402 Chn2-006 protein_coding Mus_musculus 0 928
ENSMUST00000114403 Chn2-002 protein_coding Mus_musculus 0 761
ENSMUST00000133315 Chn2-009 processed_transcript Mus_musculus 0 484
ENSMUST00000138930 Chn2-008 processed_transcript Mus_musculus 0 361

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