C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: procollagen C-endopeptidase enhancer
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106333 PCOLCE 9606 + 7:100602177-100608175 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000223061 PCOLCE-001 100602177-100608175 protein_coding
  ENST00000460002 PCOLCE-008 100604817-100605552 retained_intron
  ENST00000462260 PCOLCE-004 100603163-100604136 retained_intron
  ENST00000468214 PCOLCE-007 100604438-100605566 retained_intron
  ENST00000472348 PCOLCE-003 100606149-100608171 retained_intron
  ENST00000482863 PCOLCE-005 100603786-100605232 retained_intron
  ENST00000486440 PCOLCE-010 100605153-100607743 processed_transcript
  ENST00000487172 PCOLCE-006 100604032-100605590 retained_intron
  ENST00000490909 PCOLCE-009 100604988-100605765 retained_intron
  ENST00000496269 PCOLCE-002 100602403-100604905 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223061ENST00000460002ENST00000462260ENST00000472348ENST00000482863ENST00000486440ENST00000490909
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223061 22.842±0.00 94.644±0.00 N/A 0.732±0.00 37.295±34.12 7.103±5.32 12.970±10.98 22.583±2.26 6.353±3.47 19.956±18.55 2.638±0.83 58.104±49.86 47.235±3.42 63.459±0.00
ENST00000460002 N/A N/A 1.745±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462260 N/A N/A 1.175±0.00 0.366±0.00 N/A N/A N/A N/A N/A 0.989±0.00 N/A N/A N/A N/A
ENST00000472348 N/A N/A 0.420±0.00 0.405±0.31 N/A N/A N/A N/A 2.987±0.00 N/A 1.911±0.73 N/A N/A N/A
ENST00000482863 N/A N/A 1.097±0.00 N/A N/A N/A N/A N/A N/A N/A 2.999±0.00 N/A N/A N/A
ENST00000486440 N/A 52.769±0.00 N/A 0.819±0.53 N/A 10.749±0.00 N/A 20.893±0.00 N/A 23.069±0.00 2.319±0.00 N/A N/A N/A
ENST00000490909 N/A N/A 2.565±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005518 IDA collagen binding
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0007275 TAS multicellular organismal development
GO:0008201 IDA heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 IDA peptidase activator activity
GO:0031012 IDA extracellular matrix
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052057 PCOLCE (1 of 2) procollagen C-endopeptidase enhancer protein_coding Danio_rerio
ENSDARG00000056913 PCOLCE (2 of 2) procollagen C-endopeptidase enhancer protein_coding Danio_rerio
ENSMUSG00000029718 Pcolce procollagen C-endopeptidase enhancer protein protein_coding Mus_musculus

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