C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: procollagen C-endopeptidase enhancer protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000029718 Pcolce 10090 - 5:137605103-137613784 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000031731 Pcolce-001 137605103-137611487 protein_coding
  ENSMUST00000054564 Pcolce-002 137605108-137611376 protein_coding
  ENSMUST00000124693 Pcolce-010 137607510-137613784 protein_coding
  ENSMUST00000128755 Pcolce-003 137605103-137611408 retained_intron
  ENSMUST00000131703 Pcolce-008 137607018-137608192 retained_intron
  ENSMUST00000136649 Pcolce-004 137607085-137611343 processed_transcript
  ENSMUST00000137210 Pcolce-007 137608939-137611326 processed_transcript
  ENSMUST00000142675 Pcolce-006 137607434-137610702 protein_coding
  ENSMUST00000146589 Pcolce-009 137605105-137605798 retained_intron
  ENSMUST00000148662 Pcolce-005 137607721-137611319 retained_intron
  ENSMUST00000155251 Pcolce-011 137607510-137613762 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000031731ENSMUST00000054564ENSMUST00000128755ENSMUST00000136649ENSMUST00000146589
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000031731 43.706±7.53 601.495±40.55 136.743±7.66 4.293±3.67 66.572±5.28 38.974±4.25 31.311±7.62 57.060±5.11 8.220±3.55 105.703±8.10 9.680±3.28 136.886±41.95 19.968±15.41 24.691±1.81
ENSMUST00000054564 N/A N/A N/A N/A 23.421±0.00 N/A N/A N/A N/A N/A 3.206±0.68 26.665±0.00 N/A N/A
ENSMUST00000128755 5.781±0.63 N/A N/A 1.106±0.00 8.427±0.00 N/A N/A N/A 0.635±0.00 N/A 1.445±0.24 18.136±5.10 N/A N/A
ENSMUST00000136649 N/A N/A N/A 2.210±0.00 N/A N/A N/A N/A N/A N/A N/A 209.752±0.00 10.715±0.59 N/A
ENSMUST00000146589 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 67.997±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005518 ISO collagen binding
GO:0005615 IEA extracellular space
GO:0006508 IDA proteolysis
GO:0008201 ISO heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 ISO peptidase activator activity
GO:0031012 IEA extracellular matrix
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000052057 PCOLCE (1 of 2) procollagen C-endopeptidase enhancer protein_coding Danio_rerio
ENSDARG00000056913 PCOLCE (2 of 2) procollagen C-endopeptidase enhancer protein_coding Danio_rerio
ENSG00000106333 PCOLCE procollagen C-endopeptidase enhancer protein_coding Homo_sapiens

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