C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: procollagen C-endopeptidase enhancer
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000223061 PCOLCE-001 ENSG00000106333 9606 + 7:100602177-100608175 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000223061
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000223061 22.842±0.00 94.644±0.00 0.732±0.00 37.295±34.12 7.103±5.32 12.970±10.98 22.583±2.26 6.353±3.47 19.956±18.55 2.638±0.83 58.104±49.86 47.235±3.42 63.459±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0005518 IDA collagen binding
GO:0005615 IDA extracellular space
GO:0006508 IEA proteolysis
GO:0007275 TAS multicellular organismal development
GO:0008201 IDA heparin binding
GO:0010952 IEA positive regulation of peptidase activity
GO:0016504 IDA peptidase activator activity
GO:0031012 IDA extracellular matrix
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031731 Pcolce-001 protein_coding Mus_musculus 0 924
ENSMUST00000128755 Pcolce-003 retained_intron Mus_musculus 0 863
ENSMUST00000142675 Pcolce-006 protein_coding Mus_musculus 0 686
ENSMUST00000148662 Pcolce-005 retained_intron Mus_musculus 0 634
ENSMUST00000124693 Pcolce-010 protein_coding Mus_musculus 0 603
ENSMUST00000136649 Pcolce-004 processed_transcript Mus_musculus 0 560
ENSMUST00000054564 Pcolce-002 protein_coding Mus_musculus 0 486
ENSMUST00000155251 Pcolce-011 protein_coding Mus_musculus 0 460
ENSMUST00000137210 Pcolce-007 processed_transcript Mus_musculus 0 211

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