C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: POU class 6 homeobox 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000106536 POU6F2 9606 + 7:38977998-39493095 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000403058 POU6F2-002 38977998-39464791 protein_coding
  ENST00000416452 POU6F2-005 39406618-39464710 nonsense_mediated_decay
  ENST00000426456 POU6F2-009 39465092-39493095 processed_transcript
  ENST00000451021 POU6F2-003 39034335-39207540 protein_coding
  ENST00000464276 POU6F2-004 39085861-39132666 processed_transcript
  ENST00000517348 POU6F2-010 39013081-39373708 processed_transcript
  ENST00000518318 POU6F2-001 39006808-39468601 protein_coding
  ENST00000520104 POU6F2-007 39085055-39433283 protein_coding
  ENST00000524147 POU6F2-006 39083561-39451701 protein_coding
  ENST00000559001 POU6F2-011 39085765-39465077 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000403058ENST00000416452ENST00000517348ENST00000518318ENST00000520104ENST00000524147
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000403058 N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416452 N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.468±0.00 N/A 0.102±0.00 N/A N/A N/A
ENST00000517348 N/A N/A 0.131±0.00 N/A 0.106±0.00 0.035±0.00 0.022±0.00 N/A 0.478±0.00 0.021±0.00 0.050±0.02 N/A 0.179±0.00
ENST00000518318 N/A 0.010±0.00 0.030±0.00 0.387±0.00 0.024±0.01 0.023±0.00 0.016±0.00 0.034±0.00 0.018±0.00 N/A 0.025±0.01 N/A N/A
ENST00000520104 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A 0.516±0.00 0.403±0.00
ENST00000524147 N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007JU CIL_0007JU_0001 UCNEbase 7:38863466-39148105
CIL_0006I6 CIL_0006I6_0002 CGP 7:38977998-39610320

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 TAS:IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IC nucleus
GO:0006355 TAS:IEA regulation of transcription, DNA-templated
GO:0006366 TAS transcription from RNA polymerase II promoter
GO:0007402 TAS ganglion mother cell fate determination
GO:0007417 TAS central nervous system development
GO:0007601 TAS visual perception

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086362 pou6f2 POU class 6 homeobox 2 protein_coding Danio_rerio
ENSMUSG00000009734 Pou6f2 POU domain, class 6, transcription factor 2 protein_coding Mus_musculus

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