C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0007JU_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
POU6F2 UCNEbase 9606 7:38863466-39148105
GeneTranscriptPositionBiotype
ENSG00000106536 (POU6F2)
POU class 6 homeobox 2 		ENST00000403058 (POU6F2-002) 38977998-39464791 protein_coding
ENST00000416452 (POU6F2-005) 39406618-39464710 nonsense_mediated_decay
ENST00000426456 (POU6F2-009) 39465092-39493095 processed_transcript
ENST00000451021 (POU6F2-003) 39034335-39207540 protein_coding
ENST00000464276 (POU6F2-004) 39085861-39132666 processed_transcript
ENST00000517348 (POU6F2-010) 39013081-39373708 processed_transcript
ENST00000518318 (POU6F2-001) 39006808-39468601 protein_coding
ENST00000520104 (POU6F2-007) 39085055-39433283 protein_coding
ENST00000524147 (POU6F2-006) 39083561-39451701 protein_coding
ENST00000559001 (POU6F2-011) 39085765-39465077 protein_coding

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007JU_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
POU6F2 UCNEbase 9606 7:39148106-39498549
GeneTranscriptPositionBiotype
ENSG00000106536 (POU6F2)
POU class 6 homeobox 2 		ENST00000403058 (POU6F2-002) 38977998-39464791 protein_coding
ENST00000416452 (POU6F2-005) 39406618-39464710 nonsense_mediated_decay
ENST00000426456 (POU6F2-009) 39465092-39493095 processed_transcript
ENST00000451021 (POU6F2-003) 39034335-39207540 protein_coding
ENST00000464276 (POU6F2-004) 39085861-39132666 processed_transcript
ENST00000517348 (POU6F2-010) 39013081-39373708 processed_transcript
ENST00000518318 (POU6F2-001) 39006808-39468601 protein_coding
ENST00000520104 (POU6F2-007) 39085055-39433283 protein_coding
ENST00000524147 (POU6F2-006) 39083561-39451701 protein_coding
ENST00000559001 (POU6F2-011) 39085765-39465077 protein_coding
ENSG00000224122 (POU6F2-AS1)
POU6F2 antisense RNA 1 		ENST00000433519 (POU6F2-AS1-001) 39404598-39406346 antisense

Homo sapiens Ensembl (GRCh38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007JU_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
POU6F2 UCNEbase 10090 13:18085487-18744399
GeneTranscriptPositionBiotype
ENSMUSG00000009734 (Pou6f2)
POU domain, class 6, transcription factor 2 		ENSMUST00000139064 (Pou6f2-001) 18121101-18382041 protein_coding
ENSMUST00000175703 (Pou6f2-003) 18125093-18382041 protein_coding
ENSMUST00000175768 (Pou6f2-002) 18148304-18382041 processed_transcript
ENSMUST00000176795 (Pou6f2-004) 18125124-18172535 nonsense_mediated_decay
ENSMUST00000176898 (Pou6f2-005) 18138821-18186486 processed_transcript
ENSMUST00000184299 (Pou6f2-201) 18138821-18172540 protein_coding
ENSMUSG00000041236 (Vps41)
vacuolar protein sorting 41 (yeast) 		ENSMUST00000072961 (Vps41-201) 18717292-18866809 protein_coding

Mus musculus Ensembl (GRCm38)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11
CIL_0007JU_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
POU6F2 UCNEbase 7955 24:9749543-10097646
GeneTranscriptPositionBiotype
ENSDARG00000045423 (BX571823.1)
Uncharacterized protein 		ENSDART00000066797 (BX571823.1-202) 9829070-9831484 protein_coding
ENSDART00000111521 (BX571823.1-201) 9828798-9831484 protein_coding
ENSDARG00000045424 (zgc:173856)
zgc:173856 		ENSDART00000137250 (zgc:173856-001) 9819383-9822071 protein_coding
ENSDARG00000063573 (vps41)
vacuolar protein sorting 41 homolog (S. cerevisiae) 		ENSDART00000092975 (vps41-201) 9696959-9760863 protein_coding
ENSDART00000143390 (vps41-001) 9696581-9761020 protein_coding
ENSDART00000145845 (vps41-002) 9698792-9750092 nonsense_mediated_decay
ENSDARG00000074157 (BX571823.2)
 ENSDART00000114084 (BX571823.2-201) 9777359-9778733 pseudogene
ENSDARG00000076046 (BX571823.3)
 ENSDART00000115275 (BX571823.3-201) 9795862-9797208 pseudogene
ENSDARG00000077076 (BX571823.4)
 ENSDART00000111700 (BX571823.4-201) 9788558-9790364 pseudogene
ENSDARG00000078638 (zgc:171750)
zgc:171750 		ENSDART00000106244 (zgc:171750-001) 9804156-9806888 protein_coding
ENSDARG00000086362 (pou6f2)
POU class 6 homeobox 2 		ENSDART00000126668 (pou6f2-201) 9855503-10076387 protein_coding
ENSDART00000143107 (pou6f2-003) 10038019-10071029 processed_transcript
ENSDART00000144186 (pou6f2-001) 9839895-10072942 protein_coding
ENSDART00000147489 (pou6f2-002) 10038017-10070775 processed_transcript
ENSDARG00000089108 (BX571823.5)
 ENSDART00000106252 (BX571823.5-201) 9783009-9784529 pseudogene
ENSDARG00000092885 (zgc:171977)
zgc:171977 		ENSDART00000138576 (zgc:171977-001) 9777358-9780072 protein_coding
ENSDARG00000092924 (zgc:171474)
zgc:171474 		ENSDART00000124341 (zgc:171474-001) 9812391-9815242 protein_coding
ENSDARG00000093216 (si:ch211-146l10.7)
si:ch211-146l10.7 		ENSDART00000136274 (si:ch211-146l10.7-001) 9795807-9798678 protein_coding
ENSDARG00000095281 (zgc:152652)
zgc:152652 		ENSDART00000137794 (zgc:152652-001) 9788557-9791883 protein_coding

Danio rerio Ensembl (Zv9)

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007JU_0001ENSG00000106536ENST00000403058ENST00000416452ENST00000426456ENST00000451021ENST00000464276ENST00000517348ENST00000518318ENST00000520104ENST00000524147ENST00000559001CIL_0007JU_0002ENSG00000106536ENST00000403058ENST00000416452ENST00000426456ENST00000451021ENST00000464276ENST00000517348ENST00000518318ENST00000520104ENST00000524147ENST00000559001ENSG00000224122ENST00000433519CIL_0007JU_0003ENSMUSG00000009734ENSMUST00000139064ENSMUST00000175703ENSMUST00000175768ENSMUST00000176795ENSMUST00000176898ENSMUST00000184299ENSMUSG00000041236ENSMUST00000072961CIL_0007JU_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0007JU_0001ENSG00000106536ENST00000403058ENST00000416452ENST00000517348ENST00000518318ENST00000520104ENST00000524147CIL_0007JU_0002ENSG00000106536ENST00000403058ENST00000416452ENST00000517348ENST00000518318ENST00000520104ENST00000524147ENSG00000224122ENST00000433519CIL_0007JU_0003ENSMUSG00000009734ENSMUST00000139064ENSMUST00000175703ENSMUST00000175768ENSMUST00000176795ENSMUST00000184299ENSMUSG00000041236ENSMUST00000072961CIL_0007JU_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
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106536 ENST00000403058 N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416452 N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.468±0.00 N/A 0.102±0.00 N/A N/A N/A N/A
ENST00000426456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517348 N/A N/A 0.131±0.00 N/A 0.106±0.00 0.035±0.00 0.022±0.00 N/A 0.478±0.00 0.021±0.00 N/A 0.050±0.02 N/A 0.179±0.00
ENST00000518318 N/A 0.010±0.00 0.030±0.00 0.387±0.00 0.024±0.01 0.023±0.00 0.016±0.00 0.034±0.00 0.018±0.00 N/A N/A 0.025±0.01 N/A N/A
ENST00000520104 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.516±0.00 0.403±0.00
ENST00000524147 N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000106536 ENST00000403058 N/A N/A N/A 0.322±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416452 N/A N/A N/A N/A N/A 0.020±0.00 N/A 0.468±0.00 N/A 0.102±0.00 N/A N/A N/A N/A
ENST00000426456 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000451021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464276 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000517348 N/A N/A 0.131±0.00 N/A 0.106±0.00 0.035±0.00 0.022±0.00 N/A 0.478±0.00 0.021±0.00 N/A 0.050±0.02 N/A 0.179±0.00
ENST00000518318 N/A 0.010±0.00 0.030±0.00 0.387±0.00 0.024±0.01 0.023±0.00 0.016±0.00 0.034±0.00 0.018±0.00 N/A N/A 0.025±0.01 N/A N/A
ENST00000520104 0.067±0.00 N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.516±0.00 0.403±0.00
ENST00000524147 N/A N/A N/A 0.591±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000559001 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000224122 ENST00000433519 N/A N/A N/A N/A N/A N/A N/A 0.378±0.00 1.515±0.00 N/A N/A N/A N/A 0.145±0.05
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000009734 ENSMUST00000139064 N/A N/A 0.001±0.00 0.496±0.28 N/A N/A 0.005±0.00 N/A 0.001±0.00 N/A N/A 0.004±0.00 0.023±0.02 N/A
ENSMUST00000175703 N/A N/A N/A 0.816±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A
ENSMUST00000175768 N/A N/A N/A N/A N/A N/A 0.045±0.01 N/A 0.007±0.00 N/A N/A 0.046±0.01 0.092±0.00 1.293±0.00
ENSMUST00000176795 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.050±0.00 N/A N/A
ENSMUST00000176898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000184299 N/A N/A N/A N/A N/A 0.084±0.02 N/A N/A N/A N/A N/A N/A N/A 0.653±0.00
ENSMUSG00000041236 ENSMUST00000072961 15.088±2.39 9.933±2.89 19.852±2.16 33.128±9.79 10.297±2.17 6.960±2.00 6.470±1.28 12.059±3.02 7.496±1.83 9.671±1.34 12.105±0.49 16.636±6.21 17.409±1.71 4.956±1.21
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000045423 ENSDART00000066797 N/A N/A N/A 0.056±0.00 N/A N/A 0.130±0.11 N/A N/A N/A 0.308±0.00 N/A N/A N/A
ENSDART00000111521 N/A N/A N/A 1.011±0.00 N/A N/A 0.268±0.00 197.515±0.00 N/A N/A N/A N/A N/A N/A
ENSDARG00000045424 ENSDART00000137250 N/A N/A N/A 1.539±1.32 N/A N/A 0.596±0.00 74.584±102.95 8.005±0.00 N/A 0.244±0.00 N/A N/A N/A
ENSDARG00000063573 ENSDART00000092975 N/A N/A N/A 6.485±1.74 N/A N/A 1.615±0.50 3.006±0.00 0.296±0.00 N/A N/A N/A N/A N/A
ENSDART00000143390 N/A N/A N/A 11.446±2.43 N/A N/A 3.480±2.95 6.312±0.00 0.293±0.00 N/A 3.322±0.00 N/A N/A N/A
ENSDART00000145845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000074157 ENSDART00000114084 N/A N/A N/A 0.041±0.00 N/A N/A 0.036±0.00 1.958±0.00 2.429±0.00 N/A 0.245±0.00 N/A N/A N/A
ENSDARG00000076046 ENSDART00000115275 N/A N/A N/A N/A N/A N/A N/A N/A 1.635±0.00 N/A 0.111±0.00 N/A N/A N/A
ENSDARG00000077076 ENSDART00000111700 N/A N/A N/A N/A N/A N/A N/A 1.328±0.64 N/A N/A 0.265±0.00 N/A N/A N/A
ENSDARG00000078638 ENSDART00000106244 N/A N/A N/A 0.126±0.05 N/A N/A 0.656±0.00 68.600±67.39 5.048±0.00 N/A 0.302±0.00 N/A N/A N/A
ENSDARG00000086362 ENSDART00000126668 N/A N/A N/A 0.906±0.08 N/A N/A N/A 0.041±0.02 N/A N/A 0.041±0.00 N/A N/A N/A
ENSDART00000143107 N/A N/A N/A N/A N/A N/A N/A 0.121±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000144186 N/A N/A N/A N/A N/A N/A 0.075±0.02 0.178±0.07 0.024±0.00 N/A 0.007±0.00 N/A N/A N/A
ENSDART00000147489 N/A N/A N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A
ENSDARG00000089108 ENSDART00000106252 N/A N/A N/A 0.499±0.42 N/A N/A 0.266±0.00 53.871±0.00 1.683±0.00 N/A 0.134±0.00 N/A N/A N/A
ENSDARG00000092885 ENSDART00000138576 N/A N/A N/A 1.138±1.09 N/A N/A 0.542±0.00 54.695±72.00 4.782±0.00 N/A 0.233±0.00 N/A N/A N/A
ENSDARG00000092924 ENSDART00000124341 N/A N/A N/A 0.778±0.77 N/A N/A 0.480±0.00 41.833±58.78 5.305±0.00 N/A 0.304±0.00 N/A N/A N/A
ENSDARG00000093216 ENSDART00000136274 N/A N/A N/A 0.878±1.13 N/A N/A 0.668±0.00 60.087±84.03 6.550±0.00 N/A 0.227±0.00 N/A N/A N/A
ENSDARG00000095281 ENSDART00000137794 N/A N/A N/A 1.419±1.28 N/A N/A 0.205±0.00 37.434±52.25 3.495±0.00 N/A N/A N/A N/A N/A

Loading