C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BRCA2 and CDKN1A interacting protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000107949 BCCIP 9606 + 10:125823546-125853695 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000278100 BCCIP-002 125823546-125836553 protein_coding
  ENST00000299130 BCCIP-003 125823546-125842805 protein_coding
  ENST00000368759 BCCIP-001 125823546-125853695 protein_coding
  ENST00000463330 BCCIP-005 125823610-125831650 processed_transcript
  ENST00000478798 BCCIP-004 125825494-125831537 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000278100ENST00000299130ENST00000368759
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000278100 13.574±0.00 18.892±0.00 N/A 5.131±2.41 8.372±5.26 11.232±0.00 6.315±4.41 5.892±2.36 8.545±4.75 8.259±0.00 6.963±5.46 10.235±3.28 7.097±2.60 12.233±0.00
ENST00000299130 N/A N/A 3.868±0.00 1.894±0.07 3.117±0.00 4.594±1.83 1.140±0.00 4.854±4.04 2.120±0.00 2.688±0.62 N/A 5.950±2.04 2.842±0.02 4.990±0.00
ENST00000368759 4.178±0.00 6.376±0.00 N/A 2.761±0.00 4.124±0.00 5.596±0.00 N/A 4.746±2.87 4.471±0.00 2.359±0.00 6.015±0.00 8.742±0.00 7.283±4.30 19.814±4.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001V6 CIL_0001V6_0001 CGP 10:125784980-125853695
CIL_0001V9 CIL_0001V9_0001 CGP 10:125823546-125896436

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000079 IDA regulation of cyclin-dependent protein serine/threonine kinase activity
GO:0005515 IPI protein binding
GO:0005634 TAS nucleus
GO:0006281 IEA DNA repair
GO:0007049 IEA cell cycle
GO:0019207 IDA kinase regulator activity
GO:0019908 IDA nuclear cyclin-dependent protein kinase holoenzyme complex
GO:0044822 IDA poly(A) RNA binding
GO:0061101 IDA neuroendocrine cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000004948 bccip BRCA2 and CDKN1A interacting protein protein_coding Danio_rerio
ENSMUSG00000030983 Bccip BRCA2 and CDKN1A interacting protein protein_coding Mus_musculus

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