C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001V9_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000107949-ENSG00000089876 CGP 9606 10:125823546-125896436
GeneTranscriptPositionBiotype
ENSG00000089876 (DHX32)
DEAH (Asp-Glu-Ala-His) box polypeptide 32 		ENST00000284690 (DHX32-001) 125836340-125881315 protein_coding
ENST00000368721 (DHX32-002) 125836337-125854859 protein_coding
ENST00000415732 (DHX32-003) 125867129-125896436 protein_coding
ENSG00000107949 (BCCIP)
BRCA2 and CDKN1A interacting protein 		ENST00000278100 (BCCIP-002) 125823546-125836553 protein_coding
ENST00000299130 (BCCIP-003) 125823546-125842805 protein_coding
ENST00000368759 (BCCIP-001) 125823546-125853695 protein_coding
ENST00000463330 (BCCIP-005) 125823610-125831650 processed_transcript
ENST00000478798 (BCCIP-004) 125825494-125831537 processed_transcript
ENSG00000277371 (Metazoa_SRP)
Metazoan signal recognition particle RNA 		ENST00000616367 (Metazoa_SRP.1-423) 125869295-125869576 misc_RNA
CIL_0001V9_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000030983-ENSMUSG00000030986 CGP 10090 7:133709333-133782726
GeneTranscriptPositionBiotype
ENSMUSG00000030979 (Uros)
uroporphyrinogen III synthase 		ENSMUST00000033276 (Uros-001) 133686365-133709281 protein_coding
ENSMUST00000106144 (Uros-005) 133692134-133709059 protein_coding
ENSMUST00000106145 (Uros-002) 133686356-133709069 protein_coding
ENSMUST00000106146 (Uros-003) 133686356-133708958 protein_coding
ENSMUST00000124759 (Uros-007) 133701893-133709057 protein_coding
ENSMUST00000135760 (Uros-004) 133686243-133709094 retained_intron
ENSMUST00000144789 (Uros-009) 133686961-133698080 processed_transcript
ENSMUST00000151348 (Uros-006) 133701895-133710072 protein_coding
ENSMUST00000153698 (Uros-008) 133701839-133702616 protein_coding
ENSMUSG00000030983 (Bccip)
BRCA2 and CDKN1A interacting protein 		ENSMUST00000033282 (Bccip-001) 133709333-133721145 protein_coding
ENSMUST00000132885 (Bccip-003) 133709402-133714313 processed_transcript
ENSMUST00000140472 (Bccip-005) 133717379-133719215 retained_intron
ENSMUST00000151711 (Bccip-004) 133714742-133720941 processed_transcript
ENSMUST00000157077 (Bccip-002) 133709348-133715446 retained_intron
ENSMUSG00000030986 (Dhx32)
DEAH (Asp-Glu-Ala-His) box polypeptide 32 		ENSMUST00000033290 (Dhx32-001) 133720942-133776803 protein_coding
ENSMUST00000063669 (Dhx32-002) 133721110-133782726 protein_coding
ENSMUST00000106139 (Dhx32-003) 133721048-133776701 protein_coding
ENSMUST00000130182 (Dhx32-005) 133749009-133776687 protein_coding
ENSMUST00000135989 (Dhx32-006) 133759678-133776509 protein_coding
ENSMUST00000136301 (Dhx32-009) 133723044-133730900 processed_transcript
ENSMUST00000140593 (Dhx32-004) 133720946-133760269 processed_transcript
ENSMUST00000146211 (Dhx32-007) 133748564-133759472 processed_transcript
ENSMUST00000149876 (Dhx32-008) 133748864-133759829 protein_coding
ENSMUSG00000053111 (Fank1)
fibronectin type 3 and ankyrin repeat domains 1 		ENSMUST00000065359 (Fank1-001) 133776861-133881532 protein_coding
ENSMUST00000121560 (Fank1-003) 133776942-133880865 protein_coding
ENSMUST00000151031 (Fank1-002) 133776891-133876831 protein_coding
ENSMUSG00000081431 (Gm15483)
predicted gene 15483 		ENSMUST00000120338 (Gm15483-001) 133738479-133738934 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V9_0001ENSG00000089876ENST00000284690ENST00000368721ENST00000415732ENSG00000107949ENST00000278100ENST00000299130ENST00000368759ENST00000463330ENST00000478798ENSG00000277371ENST00000616367CIL_0001V9_0002ENSMUSG00000030979ENSMUST00000033276ENSMUST00000106144ENSMUST00000106145ENSMUST00000106146ENSMUST00000124759ENSMUST00000135760ENSMUST00000144789ENSMUST00000151348ENSMUST00000153698ENSMUSG00000030983ENSMUST00000033282ENSMUST00000132885ENSMUST00000140472ENSMUST00000151711ENSMUST00000157077ENSMUSG00000030986ENSMUST00000033290ENSMUST00000063669ENSMUST00000106139ENSMUST00000130182ENSMUST00000135989ENSMUST00000136301ENSMUST00000140593ENSMUST00000146211ENSMUST00000149876ENSMUSG00000053111ENSMUST00000065359ENSMUST00000121560ENSMUST00000151031ENSMUSG00000081431ENSMUST00000120338
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001V9_0001ENSG00000089876ENST00000284690ENST00000368721ENSG00000107949ENST00000278100ENST00000299130ENST00000368759ENSG00000277371ENST00000616367CIL_0001V9_0002ENSMUSG00000030979ENSMUST00000033276ENSMUST00000106144ENSMUST00000106145ENSMUST00000106146ENSMUST00000135760ENSMUST00000144789ENSMUST00000151348ENSMUSG00000030983ENSMUST00000033282ENSMUST00000151711ENSMUST00000157077ENSMUSG00000030986ENSMUST00000033290ENSMUST00000063669ENSMUST00000106139ENSMUST00000130182ENSMUSG00000053111ENSMUST00000065359ENSMUST00000121560ENSMUST00000151031ENSMUSG00000081431ENSMUST00000120338
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000089876 ENST00000284690 N/A N/A N/A N/A N/A 3.464±0.00 N/A 7.003±0.00 N/A N/A N/A 8.903±6.07 N/A 23.699±0.00
ENST00000368721 N/A N/A 1.584±0.00 1.299±0.00 2.741±0.00 N/A N/A N/A N/A N/A N/A 15.599±0.00 6.737±0.00 N/A
ENST00000415732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000107949 ENST00000278100 13.574±0.00 18.892±0.00 N/A 5.131±2.41 8.372±5.26 11.232±0.00 6.315±4.41 5.892±2.36 8.545±4.75 8.259±0.00 6.963±5.46 10.235±3.28 7.097±2.60 12.233±0.00
ENST00000299130 N/A N/A 3.868±0.00 1.894±0.07 3.117±0.00 4.594±1.83 1.140±0.00 4.854±4.04 2.120±0.00 2.688±0.62 N/A 5.950±2.04 2.842±0.02 4.990±0.00
ENST00000368759 4.178±0.00 6.376±0.00 N/A 2.761±0.00 4.124±0.00 5.596±0.00 N/A 4.746±2.87 4.471±0.00 2.359±0.00 6.015±0.00 8.742±0.00 7.283±4.30 19.814±4.02
ENST00000463330 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478798 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000277371 ENST00000616367 0.327±0.00 1.373±0.00 N/A 0.702±0.00 1.155±0.00 0.397±0.00 0.331±0.00 1.511±0.00 0.123±0.00 0.270±0.00 0.798±0.00 0.412±0.22 N/A 1.055±0.41
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030979 ENSMUST00000033276 2.773±0.75 2.366±0.00 N/A 3.035±1.64 1.846±0.53 1.916±0.46 2.691±0.63 2.621±0.56 3.229±0.95 N/A 3.646±1.33 3.338±1.02 3.804±0.04 1.164±0.13
ENSMUST00000106144 N/A N/A N/A 2.372±0.00 N/A N/A N/A N/A N/A N/A N/A 3.668±0.00 4.631±2.39 1.335±0.00
ENSMUST00000106145 3.710±0.78 8.942±2.01 3.945±0.97 3.125±1.07 4.006±0.64 5.034±1.65 4.498±1.29 7.400±1.46 7.773±4.85 2.979±0.64 3.432±0.96 4.451±1.45 3.898±1.73 2.497±0.25
ENSMUST00000106146 N/A N/A N/A 2.837±0.25 3.052±0.75 N/A N/A N/A 44.495±25.70 N/A 2.047±1.05 3.241±0.71 5.294±3.61 0.561±0.00
ENSMUST00000124759 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135760 4.327±1.35 N/A 6.360±2.98 6.174±3.35 6.285±0.61 2.832±1.81 1.263±0.00 3.185±0.30 16.872±12.37 2.723±1.15 1.025±0.22 4.609±1.43 3.987±0.99 1.604±0.06
ENSMUST00000144789 N/A N/A N/A N/A 9.779±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151348 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 11.885±6.22 N/A
ENSMUST00000153698 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000030983 ENSMUST00000033282 N/A N/A 35.659±3.88 18.224±1.24 N/A N/A 8.568±0.59 9.321±0.59 24.073±14.89 N/A 36.392±3.94 26.161±1.37 30.749±9.32 N/A
ENSMUST00000132885 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140472 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151711 N/A N/A N/A 37.343±0.00 N/A N/A 12.890±1.90 22.757±5.44 16.015±4.10 13.589±1.54 N/A 43.626±23.92 53.921±26.75 14.284±0.00
ENSMUST00000157077 N/A N/A N/A 16.979±0.00 N/A N/A N/A N/A N/A N/A N/A 34.102±0.00 23.774±0.00 8.018±0.00
ENSMUSG00000030986 ENSMUST00000033290 31.457±1.24 16.121±2.31 13.459±1.07 9.568±0.73 14.436±2.74 15.438±2.93 6.299±0.39 10.235±2.87 5.503±1.04 9.568±1.76 12.456±1.52 19.061±3.49 13.465±4.78 7.906±0.39
ENSMUST00000063669 N/A N/A N/A 4.991±0.00 N/A 17.587±1.76 N/A 2.692±0.00 3.566±0.50 2.330±0.55 6.035±0.77 11.079±4.52 8.834±1.50 5.323±0.61
ENSMUST00000106139 24.620±3.06 3.449±0.00 N/A 7.248±0.53 19.480±12.33 N/A 2.860±0.03 3.614±0.65 3.681±0.19 N/A N/A 9.894±2.54 9.814±3.28 3.747±0.45
ENSMUST00000130182 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 50.814±9.19 28.030±0.00
ENSMUST00000135989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136301 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146211 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000149876 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000053111 ENSMUST00000065359 0.103±0.02 0.140±0.05 0.108±0.05 1.966±0.47 0.065±0.04 0.188±0.05 0.058±0.02 0.041±0.02 0.029±0.02 1.155±0.76 0.028±0.01 1.441±0.92 0.601±0.19 118.610±19.65
ENSMUST00000121560 N/A N/A N/A 4.388±0.00 N/A N/A N/A N/A 0.013±0.00 N/A N/A 5.690±0.00 1.499±0.11 288.061±0.00
ENSMUST00000151031 0.035±0.00 0.101±0.00 N/A N/A N/A 0.209±0.01 0.091±0.00 0.090±0.03 N/A 0.207±0.00 N/A N/A N/A 40.452±0.00
ENSMUSG00000081431 ENSMUST00000120338 0.141±0.04 0.156±0.00 0.662±0.30 0.137±0.02 0.219±0.10 0.459±0.30 N/A N/A 0.151±0.08 0.186±0.06 0.183±0.08 0.261±0.12 0.244±0.09 0.135±0.04

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