C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108091 CCDC6 9606 - 10:59788763-59906656 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000263102 CCDC6-001 59788763-59906656 protein_coding
  ENST00000491922 CCDC6-002 59791752-59805576 retained_intron
  ENST00000518638 CCDC6-003 59806444-59812728 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000263102
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000263102 8.033±0.00 10.673±0.00 2.068±0.00 7.818±4.51 7.305±3.64 8.670±3.09 3.389±2.55 6.182±4.08 4.362±1.40 5.789±0.98 3.308±2.35 9.054±2.03 6.419±2.63 8.970±4.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006PD CIL_0006PD_0002 CGP 10:59650761-59906656
CIL_0002W5 CIL_0002W5_0002 CGP 10:59788763-60733490

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005200 TAS structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005737 IDA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0008150 ND biological_process
GO:0017124 IEA SH3 domain binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043334 ccdc6a coiled-coil domain containing 6a protein_coding Danio_rerio
ENSMUSG00000048701 Ccdc6 coiled-coil domain containing 6 protein_coding Mus_musculus

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