C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: regulator of G-protein signaling 9
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108370 RGS9 9606 + 17:65137431-65227703 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000262406 RGS9-003 65137474-65227690 protein_coding
  ENST00000443584 RGS9-007 65137448-65225588 protein_coding
  ENST00000449996 RGS9-002 65137469-65227703 protein_coding
  ENST00000577186 RGS9-009 65137592-65180037 processed_transcript
  ENST00000577595 RGS9-004 65188704-65227692 retained_intron
  ENST00000581175 RGS9-005 65137524-65210662 retained_intron
  ENST00000583473 RGS9-008 65137431-65158791 retained_intron
  ENST00000584234 RGS9-001 65137454-65227678 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000262406ENST00000443584ENST00000449996ENST00000577186ENST00000577595ENST00000581175ENST00000583473ENST00000584234
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000262406 N/A 0.373±0.00 0.825±0.00 0.302±0.00 1.905±1.50 0.030±0.00 0.425±0.00 N/A 1.905±1.52 N/A 0.453±0.28 1.040±0.47 1.014±0.75
ENST00000443584 0.252±0.00 N/A 0.921±0.00 N/A 0.364±0.00 N/A 0.187±0.00 0.549±0.00 N/A 0.038±0.00 0.045±0.00 N/A N/A
ENST00000449996 N/A 0.445±0.00 0.857±0.00 0.554±0.00 N/A N/A N/A 0.685±0.00 N/A N/A 0.913±0.01 0.597±0.34 N/A
ENST00000577186 N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A 0.307±0.14 0.187±0.00 1.075±0.00 0.625±0.00
ENST00000577595 0.065±0.00 N/A N/A 0.168±0.00 N/A 0.045±0.00 0.336±0.00 0.132±0.00 N/A 0.052±0.00 N/A N/A N/A
ENST00000581175 N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 0.230±0.00 N/A N/A
ENST00000583473 N/A N/A N/A N/A 1.210±0.00 N/A 0.254±0.07 N/A N/A N/A N/A N/A N/A
ENST00000584234 N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UC CIL_0007UC_0001 VISTA 17:64865144-65468148
CIL_0003AK CIL_0003AK_0002 CGP 17:65010715-65227703

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005096 IBA GTPase activator activity
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005834 IEA heterotrimeric G-protein complex
GO:0005886 IBA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007212 IEA dopamine receptor signaling pathway
GO:0007399 IEA nervous system development
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008277 TAS:IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0032403 IEA protein complex binding
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IEA positive regulation of GTPase activity
GO:0043627 IEA response to estrogen

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000037925 rgs9a regulator of G-protein signaling 9a protein_coding Danio_rerio
ENSDARG00000045156 rgs9b regulator of G-protein signaling 9b protein_coding Danio_rerio
ENSMUSG00000020599 Rgs9 regulator of G-protein signaling 9 protein_coding Mus_musculus

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