C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: regulator of G-protein signaling 9
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000262406 RGS9-003 ENSG00000108370 9606 + 17:65137474-65227690 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000262406
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000262406 0.373±0.00 0.825±0.00 0.302±0.00 1.905±1.50 0.030±0.00 0.425±0.00 1.905±1.52 0.453±0.28 1.040±0.47 1.014±0.75

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007UC CIL_0007UC_0001 VISTA 17:64865144-65468148
CIL_0003AK CIL_0003AK_0002 CGP 17:65010715-65227703

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004871 IEA signal transducer activity
GO:0005096 IBA GTPase activator activity
GO:0005634 IEA nucleus
GO:0005737 IBA cytoplasm
GO:0005834 IEA heterotrimeric G-protein complex
GO:0005886 IBA plasma membrane
GO:0007186 IEA G-protein coupled receptor signaling pathway
GO:0007212 IEA dopamine receptor signaling pathway
GO:0007399 IEA nervous system development
GO:0007601 IEA visual perception
GO:0007603 TAS phototransduction, visible light
GO:0008277 TAS:IEA regulation of G-protein coupled receptor protein signaling pathway
GO:0016056 TAS rhodopsin mediated signaling pathway
GO:0022400 TAS regulation of rhodopsin mediated signaling pathway
GO:0032403 IEA protein complex binding
GO:0035556 IEA intracellular signal transduction
GO:0038032 IEA termination of G-protein coupled receptor signaling pathway
GO:0043547 IEA positive regulation of GTPase activity
GO:0043627 IEA response to estrogen

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020920 Rgs9-001 protein_coding Mus_musculus 0 2248
ENSMUST00000106706 Rgs9-003 protein_coding Mus_musculus 0 1731
ENSMUST00000103062 Rgs9-004 protein_coding Mus_musculus 0 1476
ENSMUST00000106704 Rgs9-005 protein_coding Mus_musculus 0 832

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