C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003AK_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000037924-ENSDARG00000037925 CGP 7955 3:36331697-36388864
GeneTranscriptPositionBiotype
ENSDARG00000037924 (gna13b)
guanine nucleotide binding protein (G protein), alpha 13b 		ENSDART00000028883 (gna13b-001) 36331697-36364021 protein_coding
ENSDARG00000037925 (rgs9a)
regulator of G-protein signaling 9a 		ENSDART00000123630 (rgs9a-201) 36365743-36388864 protein_coding
ENSDART00000130128 (rgs9a-202) 36365695-36388806 protein_coding
ENSDART00000130591 (rgs9a-203) 36365830-36387929 protein_coding
ENSDART00000150943 (rgs9a-002) 36378404-36382532 retained_intron
ENSDART00000151203 (rgs9a-001) 36365695-36382532 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0003AK_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120063-ENSG00000108370 CGP 9606 17:65010715-65227703
GeneTranscriptPositionBiotype
ENSG00000108370 (RGS9)
regulator of G-protein signaling 9 		ENST00000262406 (RGS9-003) 65137474-65227690 protein_coding
ENST00000443584 (RGS9-007) 65137448-65225588 protein_coding
ENST00000449996 (RGS9-002) 65137469-65227703 protein_coding
ENST00000577186 (RGS9-009) 65137592-65180037 processed_transcript
ENST00000577595 (RGS9-004) 65188704-65227692 retained_intron
ENST00000581175 (RGS9-005) 65137524-65210662 retained_intron
ENST00000583473 (RGS9-008) 65137431-65158791 retained_intron
ENST00000584234 (RGS9-001) 65137454-65227678 nonsense_mediated_decay
ENSG00000120063 (GNA13)
guanine nucleotide binding protein (G protein), alpha 13 		ENST00000439174 (GNA13-001) 65010715-65056839 protein_coding
ENST00000541118 (GNA13-002) 65013788-65055774 protein_coding
ENSG00000263470 (RP11-160O5.1)
 ENST00000582940 (RP11-160O5.1-001) 65100812-65111058 lincRNA
ENSG00000265883 (RP11-169I9.2)
 ENST00000582031 (RP11-169I9.2-001) 65185319-65185482 processed_pseudogene
ENSG00000266598 (RP11-583F2.5)
 ENST00000581796 (RP11-583F2.5-001) 65051909-65053308 antisense

Homo sapiens Ensembl (GRCh38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AK_0001ENSDARG00000037924ENSDART00000028883ENSDARG00000037925ENSDART00000123630ENSDART00000130128ENSDART00000130591ENSDART00000150943ENSDART00000151203CIL_0003AK_0002ENSG00000108370ENST00000262406ENST00000443584ENST00000449996ENST00000577186ENST00000577595ENST00000581175ENST00000583473ENST00000584234ENSG00000120063ENST00000439174ENST00000541118ENSG00000263470ENST00000582940ENSG00000265883ENST00000582031ENSG00000266598ENST00000581796
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003AK_0001ENSDARG00000037924ENSDART00000028883ENSDARG00000037925ENSDART00000123630ENSDART00000130128ENSDART00000130591ENSDART00000150943CIL_0003AK_0002ENSG00000108370ENST00000262406ENST00000443584ENST00000449996ENST00000577186ENST00000577595ENST00000581175ENST00000583473ENST00000584234ENSG00000120063ENST00000439174ENSG00000263470ENST00000582940ENSG00000265883ENST00000582031ENSG00000266598ENST00000581796
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000037924 ENSDART00000028883 N/A N/A N/A 3.363±2.00 N/A N/A 4.899±0.94 N/A 0.356±0.00 N/A 2.103±0.00 N/A N/A N/A
ENSDARG00000037925 ENSDART00000123630 N/A N/A N/A 2.566±3.18 N/A N/A 4.194±3.99 0.486±0.00 0.581±0.00 N/A 1.944±0.00 N/A N/A N/A
ENSDART00000130128 N/A N/A N/A 6.930±6.32 N/A N/A 6.067±5.86 0.333±0.00 0.500±0.00 N/A 3.023±0.00 N/A N/A N/A
ENSDART00000130591 N/A N/A N/A 0.292±0.00 N/A N/A N/A 0.085±0.00 N/A N/A N/A N/A N/A N/A
ENSDART00000150943 N/A N/A N/A 0.538±0.04 N/A N/A 0.137±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSDART00000151203 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000108370 ENST00000262406 N/A 0.373±0.00 N/A 0.825±0.00 0.302±0.00 1.905±1.50 0.030±0.00 0.425±0.00 N/A 1.905±1.52 N/A 0.453±0.28 1.040±0.47 1.014±0.75
ENST00000443584 0.252±0.00 N/A N/A 0.921±0.00 N/A 0.364±0.00 N/A 0.187±0.00 0.549±0.00 N/A 0.038±0.00 0.045±0.00 N/A N/A
ENST00000449996 N/A 0.445±0.00 N/A 0.857±0.00 0.554±0.00 N/A N/A N/A 0.685±0.00 N/A N/A 0.913±0.01 0.597±0.34 N/A
ENST00000577186 N/A N/A N/A N/A 0.349±0.00 N/A N/A N/A N/A N/A 0.307±0.14 0.187±0.00 1.075±0.00 0.625±0.00
ENST00000577595 0.065±0.00 N/A N/A N/A 0.168±0.00 N/A 0.045±0.00 0.336±0.00 0.132±0.00 N/A 0.052±0.00 N/A N/A N/A
ENST00000581175 N/A N/A N/A N/A N/A N/A N/A 0.170±0.00 N/A N/A N/A 0.230±0.00 N/A N/A
ENST00000583473 N/A N/A N/A N/A N/A 1.210±0.00 N/A 0.254±0.07 N/A N/A N/A N/A N/A N/A
ENST00000584234 N/A N/A N/A N/A N/A N/A N/A N/A 0.100±0.00 N/A N/A N/A N/A N/A
ENSG00000120063 ENST00000439174 12.325±0.00 8.771±0.00 1.097±0.00 5.095±1.20 7.112±0.95 9.374±1.93 3.641±1.98 4.532±2.00 5.295±3.10 10.869±5.08 11.031±0.00 4.067±1.99 5.555±0.84 5.185±2.79
ENST00000541118 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000263470 ENST00000582940 1.665±0.00 1.118±0.00 N/A 0.730±0.53 1.030±0.97 1.025±0.62 0.758±0.02 0.737±0.21 0.506±0.06 3.373±0.00 0.707±0.47 1.189±0.45 0.571±0.04 1.505±0.57
ENSG00000265883 ENST00000582031 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.825±0.00 N/A N/A N/A N/A
ENSG00000266598 ENST00000581796 0.092±0.00 0.141±0.00 2.669±0.00 N/A 1.801±1.65 2.054±0.00 0.049±0.00 0.912±0.00 N/A 1.659±1.62 N/A 0.761±0.67 N/A N/A

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