C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 43
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108375 RNF43 9606 - 17:58352500-58417595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000407977 RNF43-003 58352500-58417352 protein_coding
  ENST00000577625 RNF43-006 58354927-58402721 protein_coding
  ENST00000577716 RNF43-001 58353676-58417582 protein_coding
  ENST00000580014 RNF43-007 58417013-58417595 processed_transcript
  ENST00000581868 RNF43-004 58356983-58417085 protein_coding
  ENST00000582293 RNF43-008 58363150-58363592 retained_intron
  ENST00000583753 RNF43-005 58353676-58415641 protein_coding
  ENST00000584437 RNF43-002 58353676-58417533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastColonHeartKidneyLiverLungOvaryPlacentaENST00000577716ENST00000583753ENST00000584437
Transcript ID Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta
ENST00000577716 N/A N/A N/A N/A 1.335±0.00 N/A N/A 9.762±0.00 4.067±0.00
ENST00000583753 N/A N/A 3.272±0.00 N/A N/A 2.011±0.00 N/A 21.617±0.00 4.591±0.00
ENST00000584437 1.039±0.00 3.934±0.00 3.371±0.00 0.358±0.00 2.747±0.00 N/A 1.303±0.00 5.829±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004842 IDA ubiquitin-protein transferase activity
GO:0004871 IEA signal transducer activity
GO:0005109 IPI frizzled binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IEA nucleus
GO:0005783 IEA endoplasmic reticulum
GO:0005887 IDA integral component of plasma membrane
GO:0007165 IEA signal transduction
GO:0008270 IEA zinc ion binding
GO:0016055 IEA Wnt signaling pathway
GO:0016567 IDA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0030178 IMP negative regulation of Wnt signaling pathway
GO:0038018 IDA Wnt receptor catabolic process
GO:0042787 IDA protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0046872 IEA metal ion binding
GO:0072089 ISS stem cell proliferation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000034177 Rnf43 ring finger protein 43 protein_coding Mus_musculus

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