C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: septin 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000108387 SEPT4 9606 - 17:58520250-58540818 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000317256 SEPT4-006 58520359-58532046 protein_coding
  ENST00000317268 SEPT4-008 58520256-58529351 protein_coding
  ENST00000393086 SEPT4-201 58520250-58527144 protein_coding
  ENST00000412945 SEPT4-001 58520359-58540818 protein_coding
  ENST00000426861 SEPT4-004 58520255-58532050 protein_coding
  ENST00000457347 SEPT4-002 58520258-58540818 protein_coding
  ENST00000577440 SEPT4-005 58520256-58532050 retained_intron
  ENST00000577729 SEPT4-022 58521748-58532066 protein_coding
  ENST00000578131 SEPT4-021 58522051-58532065 nonsense_mediated_decay
  ENST00000578747 SEPT4-025 58526578-58531642 retained_intron
  ENST00000579371 SEPT4-013 58520256-58529279 protein_coding
  ENST00000580740 SEPT4-019 58526577-58532286 processed_transcript
  ENST00000580791 SEPT4-028 58526315-58527998 processed_transcript
  ENST00000580796 SEPT4-016 58520256-58528030 retained_intron
  ENST00000580809 SEPT4-003 58521549-58532054 protein_coding
  ENST00000580844 SEPT4-012 58520299-58529303 protein_coding
  ENST00000581607 SEPT4-024 58526765-58531941 protein_coding
  ENST00000581615 SEPT4-026 58522021-58529313 nonsense_mediated_decay
  ENST00000581921 SEPT4-018 58526223-58539158 processed_transcript
  ENST00000582248 SEPT4-027 58526563-58528013 retained_intron
  ENST00000582270 SEPT4-014 58520256-58529203 retained_intron
  ENST00000582976 SEPT4-029 58529818-58531524 retained_intron
  ENST00000583114 SEPT4-017 58520250-58527981 protein_coding
  ENST00000583273 SEPT4-010 58520256-58529350 retained_intron
  ENST00000583291 SEPT4-020 58525078-58532075 protein_coding
  ENST00000584488 SEPT4-011 58520426-58529313 retained_intron
  ENST00000584528 SEPT4-023 58526254-58532065 processed_transcript
  ENST00000584789 SEPT4-007 58525162-58532037 retained_intron
  ENST00000585170 SEPT4-015 58524588-58528569 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000317256ENST00000317268ENST00000393086ENST00000577440ENST00000577729ENST00000578131ENST00000579371ENST00000580796ENST00000580844ENST00000582270ENST00000582976ENST00000583114ENST00000583273ENST00000585170
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000317256 N/A N/A N/A 88.078±0.00 N/A 1.205±0.91 8.872±0.00 4.705±0.00 1.791±1.17 N/A 2.026±0.00 N/A N/A N/A
ENST00000317268 N/A N/A N/A 65.929±47.41 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393086 5.020±0.00 5.063±0.00 N/A 52.415±20.06 3.493±0.00 N/A 3.419±2.24 N/A 6.406±0.00 9.808±0.00 N/A 4.871±2.96 3.904±0.00 19.817±0.00
ENST00000577440 N/A N/A N/A N/A 2.917±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000577729 N/A N/A N/A N/A N/A N/A 1.168±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000578131 N/A N/A N/A N/A N/A N/A N/A N/A 1.772±0.00 N/A N/A N/A N/A N/A
ENST00000579371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.819±0.00 5.182±0.00 N/A
ENST00000580796 N/A N/A N/A N/A 0.391±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000580844 3.518±0.00 3.986±0.00 N/A N/A 2.389±1.45 2.940±0.00 N/A 3.480±0.00 1.975±0.00 4.040±1.41 N/A 2.853±1.28 4.411±0.00 N/A
ENST00000582270 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.417±0.00 N/A 1.478±0.00 N/A N/A
ENST00000582976 N/A N/A 0.628±0.00 N/A N/A 0.287±0.00 N/A N/A N/A 0.954±0.00 N/A N/A N/A N/A
ENST00000583114 N/A N/A N/A 15.000±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583273 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.078±0.00 N/A N/A N/A
ENST00000585170 N/A N/A 0.275±0.00 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 NAS nucleus
GO:0005739 NAS mitochondrion
GO:0005856 IEA cytoskeleton
GO:0006184 TAS GTP catabolic process
GO:0006915 NAS apoptotic process
GO:0007049 IEA cell cycle
GO:0007286 IEA spermatid development
GO:0007420 IEA brain development
GO:0030382 IEA sperm mitochondrion organization
GO:0031105 IEA septin complex
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0031514 IEA motile cilium
GO:0036126 IEA sperm flagellum
GO:0042981 NAS regulation of apoptotic process
GO:0042995 IEA cell projection
GO:0043065 IDA positive regulation of apoptotic process
GO:0048240 IEA sperm capacitation
GO:0051301 IEA cell division
GO:0097227 IEA sperm annulus
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000010385 sept4a septin 4a protein_coding Danio_rerio
ENSMUSG00000020486 Sept4 septin 4 protein_coding Mus_musculus

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