C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: septin 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000317256 SEPT4-006 ENSG00000108387 9606 - 17:58520359-58532046 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverMuscleENST00000317256
Transcript ID Brain Colon Heart Kidney Liver Muscle
ENST00000317256 88.078±0.00 1.205±0.91 8.872±0.00 4.705±0.00 1.791±1.17 2.026±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 TAS GTPase activity
GO:0005198 TAS structural molecule activity
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 NAS nucleus
GO:0005739 NAS mitochondrion
GO:0005856 IEA cytoskeleton
GO:0006184 TAS GTP catabolic process
GO:0006915 NAS apoptotic process
GO:0007049 IEA cell cycle
GO:0031398 IDA positive regulation of protein ubiquitination
GO:0042981 NAS regulation of apoptotic process
GO:0043065 IDA positive regulation of apoptotic process
GO:0051301 IEA cell division
GO:2001244 IMP positive regulation of intrinsic apoptotic signaling pathway

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107962 Sept4-002 protein_coding Mus_musculus 0 1868
ENSMUST00000018544 Sept4-001 protein_coding Mus_musculus 0 1797
ENSMUST00000107960 Sept4-005 protein_coding Mus_musculus 0 1557
ENSMUST00000063156 Sept4-003 protein_coding Mus_musculus 0 1491
ENSMUST00000134923 Sept4-007 retained_intron Mus_musculus 0 1282
ENSMUST00000133638 Sept4-018 retained_intron Mus_musculus 0 1280
ENSMUST00000122067 Sept4-009 protein_coding Mus_musculus 0 1280
ENSMUST00000133202 Sept4-010 protein_coding Mus_musculus 0 1018
ENSMUST00000132723 Sept4-004 retained_intron Mus_musculus 0 965
ENSMUST00000107961 Sept4-013 protein_coding Mus_musculus 0 939
ENSMUST00000123081 Sept4-017 retained_intron Mus_musculus 0 774
ENSMUST00000122945 Sept4-011 protein_coding Mus_musculus 0 704
ENSMUST00000140398 Sept4-008 retained_intron Mus_musculus 0 617
ENSMUST00000127414 Sept4-015 retained_intron Mus_musculus 0 492
ENSMUST00000148216 Sept4-014 retained_intron Mus_musculus 0 492
ENSMUST00000135175 Sept4-012 retained_intron Mus_musculus 0 486
ENSMUST00000136229 Sept4-006 retained_intron Mus_musculus 0 429

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