C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: neuromedin U
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000109255 NMU 9606 - 4:55595229-55636698 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000264218 NMU-001 55595231-55636298 protein_coding
  ENST00000505262 NMU-005 55595234-55636259 protein_coding
  ENST00000507338 NMU-003 55595284-55636268 protein_coding
  ENST00000509371 NMU-004 55599152-55630462 processed_transcript
  ENST00000511469 NMU-002 55595229-55636284 protein_coding
  ENST00000515325 NMU-006 55595317-55636698 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonKidneyLungOvaryPlacentaTestisENST00000264218ENST00000505262ENST00000507338ENST00000509371ENST00000511469ENST00000515325
Transcript ID Adipose Brain Colon Kidney Lung Ovary Placenta Testis
ENST00000264218 N/A 0.793±0.00 0.327±0.00 N/A N/A 3.959±1.52 0.466±0.00 0.804±0.00
ENST00000505262 N/A N/A N/A N/A N/A N/A N/A 0.427±0.00
ENST00000507338 N/A N/A 0.912±0.00 0.115±0.00 0.082±0.00 N/A 0.120±0.03 N/A
ENST00000509371 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000511469 N/A 0.484±0.00 N/A N/A N/A 0.786±0.21 1.087±0.80 0.694±0.00
ENST00000515325 N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025F CIL_00025F_0001 CGP 4:55556525-55636698
CIL_00025E CIL_00025E_0001 CGP 4:55595229-55905034

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0005102 TAS receptor binding
GO:0005576 TAS extracellular region
GO:0006940 TAS:IEA regulation of smooth muscle contraction
GO:0007165 TAS signal transduction
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007586 TAS digestion
GO:0009648 IEA photoperiodism
GO:0019233 IEA sensory perception of pain
GO:0042755 IEA eating behavior
GO:0042922 IEA neuromedin U receptor binding
GO:0043195 IEA terminal bouton
GO:0045987 IEA positive regulation of smooth muscle contraction
GO:0046887 IEA positive regulation of hormone secretion
GO:0050806 IEA positive regulation of synaptic transmission

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043299 nmu neuromedin U protein_coding Danio_rerio
ENSMUSG00000029236 Nmu neuromedin U protein_coding Mus_musculus

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