C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00025E_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109255-ENSG00000090989 CGP 9606 4:55595229-55905034
GeneTranscriptPositionBiotype
ENSG00000090989 (EXOC1)
exocyst complex component 1 		ENST00000346134 (EXOC1-001) 55853675-55905034 protein_coding
ENST00000349598 (EXOC1-002) 55853739-55905034 protein_coding
ENST00000381295 (EXOC1-003) 55853616-55905013 protein_coding
ENST00000504321 (EXOC1-008) 55888810-55893641 retained_intron
ENST00000505501 (EXOC1-004) 55858339-55868753 retained_intron
ENST00000506936 (EXOC1-009) 55902127-55904577 retained_intron
ENST00000509302 (EXOC1-007) 55883768-55893627 retained_intron
ENST00000511971 (EXOC1-006) 55882727-55905007 retained_intron
ENSG00000109255 (NMU)
neuromedin U 		ENST00000264218 (NMU-001) 55595231-55636298 protein_coding
ENST00000505262 (NMU-005) 55595234-55636259 protein_coding
ENST00000507338 (NMU-003) 55595284-55636268 protein_coding
ENST00000509371 (NMU-004) 55599152-55630462 processed_transcript
ENST00000511469 (NMU-002) 55595229-55636284 protein_coding
ENST00000515325 (NMU-006) 55595317-55636698 processed_transcript
ENSG00000202358 (RNU6-652P)
RNA, U6 small nuclear 652, pseudogene 		ENST00000365488 (RNU6-652P-201) 55885595-55885701 snRNA
ENSG00000250821 (RP11-345F18.1)
 ENST00000504250 (RP11-345F18.1-001) 55820003-55837382 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00025E_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000029236-ENSMUSG00000036435 CGP 10090 5:76333495-76570294
GeneTranscriptPositionBiotype
ENSMUSG00000029236 (Nmu)
neuromedin U 		ENSMUST00000031146 (Nmu-001) 76333495-76363788 protein_coding
ENSMUSG00000036435 (Exoc1)
exocyst complex component 1 		ENSMUST00000049469 (Exoc1-003) 76529358-76570287 protein_coding
ENSMUST00000087133 (Exoc1-001) 76529311-76570294 protein_coding
ENSMUST00000113493 (Exoc1-002) 76529323-76570285 protein_coding
ENSMUST00000131470 (Exoc1-004) 76529344-76561802 processed_transcript
ENSMUST00000132807 (Exoc1-011) 76560369-76567203 retained_intron
ENSMUST00000134521 (Exoc1-010) 76561374-76566964 protein_coding
ENSMUST00000137018 (Exoc1-006) 76529358-76541108 retained_intron
ENSMUST00000141884 (Exoc1-007) 76541944-76549515 retained_intron
ENSMUST00000143489 (Exoc1-008) 76561236-76568016 retained_intron
ENSMUST00000143736 (Exoc1-009) 76567882-76569989 retained_intron
ENSMUST00000150829 (Exoc1-005) 76529328-76539735 retained_intron
ENSMUSG00000087037 (4930432L08Rik)
RIKEN cDNA 4930432L08 gene 		ENSMUST00000132154 (4930432L08Rik-001) 76331238-76341885 processed_transcript
ENSMUSG00000091204 (Gm7271)
predicted gene 7271 		ENSMUST00000172369 (Gm7271-201) 76484331-76516584 lincRNA
ENSMUST00000191515 (Gm7271-001) 76484040-76516628 lincRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025E_0001ENSG00000090989ENST00000346134ENST00000349598ENST00000381295ENST00000504321ENST00000505501ENST00000506936ENST00000509302ENST00000511971ENSG00000109255ENST00000264218ENST00000505262ENST00000507338ENST00000509371ENST00000511469ENST00000515325ENSG00000202358ENST00000365488ENSG00000250821ENST00000504250CIL_00025E_0002ENSMUSG00000029236ENSMUST00000031146ENSMUSG00000036435ENSMUST00000049469ENSMUST00000087133ENSMUST00000113493ENSMUST00000131470ENSMUST00000132807ENSMUST00000134521ENSMUST00000137018ENSMUST00000141884ENSMUST00000143489ENSMUST00000143736ENSMUST00000150829ENSMUSG00000087037ENSMUST00000132154ENSMUSG00000091204ENSMUST00000172369ENSMUST00000191515
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00025E_0001ENSG00000090989ENST00000346134ENST00000349598ENST00000381295ENST00000505501ENST00000511971ENSG00000109255ENST00000264218ENST00000505262ENST00000507338ENST00000509371ENST00000511469ENST00000515325ENSG00000202358ENST00000365488ENSG00000250821ENST00000504250CIL_00025E_0002ENSMUSG00000029236ENSMUST00000031146ENSMUSG00000036435ENSMUST00000049469ENSMUST00000087133ENSMUST00000113493ENSMUST00000131470ENSMUST00000132807ENSMUST00000134521ENSMUST00000141884ENSMUST00000143489ENSMUST00000143736ENSMUSG00000087037ENSMUST00000132154ENSMUSG00000091204ENSMUST00000172369ENSMUST00000191515
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090989 ENST00000346134 N/A N/A 2.099±0.00 2.158±0.00 N/A N/A N/A N/A N/A N/A 0.589±0.41 N/A 1.532±0.00 N/A
ENST00000349598 2.819±0.00 3.027±0.00 1.242±0.00 3.022±0.02 3.465±0.30 2.247±0.00 1.107±0.20 2.113±1.19 2.011±1.40 4.641±0.00 2.682±0.00 3.159±1.57 4.295±2.20 5.104±0.00
ENST00000381295 1.642±0.00 1.522±0.00 N/A 2.604±0.00 1.546±0.34 1.850±1.27 N/A 2.722±0.00 0.964±0.00 1.051±0.00 0.670±0.19 3.025±1.30 3.892±1.42 5.226±1.00
ENST00000504321 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000505501 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.535±0.00
ENST00000506936 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511971 N/A N/A N/A N/A N/A N/A N/A N/A 0.898±0.00 N/A N/A N/A N/A N/A
ENSG00000109255 ENST00000264218 N/A N/A N/A 0.793±0.00 N/A 0.327±0.00 N/A N/A N/A N/A N/A 3.959±1.52 0.466±0.00 0.804±0.00
ENST00000505262 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00
ENST00000507338 N/A N/A N/A N/A N/A 0.912±0.00 N/A 0.115±0.00 N/A 0.082±0.00 N/A N/A 0.120±0.03 N/A
ENST00000509371 0.139±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511469 N/A N/A N/A 0.484±0.00 N/A N/A N/A N/A N/A N/A N/A 0.786±0.21 1.087±0.80 0.694±0.00
ENST00000515325 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.066±0.00 N/A N/A
ENSG00000202358 ENST00000365488 N/A N/A N/A N/A N/A N/A N/A 0.351±0.00 N/A N/A N/A N/A 0.509±0.00 N/A
ENSG00000250821 ENST00000504250 N/A N/A N/A N/A 0.228±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.085±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000029236 ENSMUST00000031146 N/A N/A N/A 0.042±0.02 0.060±0.01 6.859±1.43 N/A N/A 0.012±0.00 1.878±0.24 N/A 0.340±0.20 0.030±0.02 N/A
ENSMUSG00000036435 ENSMUST00000049469 3.789±1.16 2.814±1.06 6.457±0.68 N/A 2.881±1.24 1.868±0.36 1.734±0.67 1.911±0.72 2.082±1.06 3.642±1.06 1.381±0.16 6.706±5.30 7.965±2.10 2.110±0.72
ENSMUST00000087133 2.040±0.38 N/A 2.488±0.42 N/A N/A 0.931±0.32 N/A 2.442±0.72 2.005±0.95 1.532±0.14 N/A 2.706±0.72 3.687±0.71 2.378±0.38
ENSMUST00000113493 N/A 1.736±0.49 N/A 13.976±0.41 0.845±0.04 1.795±0.27 N/A 2.434±1.20 1.288±0.48 1.051±0.00 1.429±0.25 2.210±0.76 N/A 0.924±0.00
ENSMUST00000131470 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.667±0.00 N/A N/A
ENSMUST00000132807 N/A N/A N/A 18.681±0.00 N/A N/A N/A N/A N/A N/A N/A 24.370±0.00 14.794±2.48 5.544±0.00
ENSMUST00000134521 N/A N/A N/A 73.400±0.00 N/A N/A N/A N/A N/A N/A N/A 72.025±0.00 62.871±21.01 10.042±0.00
ENSMUST00000137018 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141884 6.406±1.53 10.467±2.09 N/A N/A 7.042±2.44 6.456±2.78 N/A 2.678±0.02 1.696±0.39 5.800±0.53 N/A 21.202±2.49 N/A 4.778±0.00
ENSMUST00000143489 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.418±0.00 N/A N/A
ENSMUST00000143736 N/A N/A 12.574±2.39 N/A 4.611±1.41 3.760±0.00 N/A N/A 2.938±2.77 N/A N/A 7.121±0.29 N/A N/A
ENSMUST00000150829 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000087037 ENSMUST00000132154 N/A 0.103±0.00 0.005±0.00 0.008±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.840±0.24
ENSMUSG00000091204 ENSMUST00000172369 N/A N/A N/A 0.077±0.04 N/A N/A N/A N/A N/A N/A N/A 0.059±0.00 N/A 0.083±0.02
ENSMUST00000191515 0.054±0.00 N/A N/A 0.055±0.00 0.180±0.11 N/A N/A N/A N/A N/A N/A N/A N/A 0.053±0.01

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