C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: neuromedin U
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000264218 NMU-001 ENSG00000109255 9606 - 4:55595231-55636298 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonOvaryPlacentaTestisENST00000264218
Transcript ID Brain Colon Ovary Placenta Testis
ENST00000264218 0.793±0.00 0.327±0.00 3.959±1.52 0.466±0.00 0.804±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025F CIL_00025F_0001 CGP 4:55556525-55636698
CIL_00025E CIL_00025E_0001 CGP 4:55595229-55905034

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001696 IEA gastric acid secretion
GO:0005102 TAS receptor binding
GO:0005576 TAS extracellular region
GO:0006940 TAS:IEA regulation of smooth muscle contraction
GO:0007165 TAS signal transduction
GO:0007186 TAS G-protein coupled receptor signaling pathway
GO:0007218 IEA neuropeptide signaling pathway
GO:0007586 TAS digestion
GO:0009648 IEA photoperiodism
GO:0019233 IEA sensory perception of pain
GO:0042755 IEA eating behavior
GO:0042922 IEA neuromedin U receptor binding
GO:0043195 IEA terminal bouton
GO:0045987 IEA positive regulation of smooth muscle contraction
GO:0046887 IEA positive regulation of hormone secretion
GO:0050806 IEA positive regulation of synaptic transmission

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000031146 Nmu-001 protein_coding Mus_musculus 0 433

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