C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110025 SNX15 9606 + 11:65027408-65040572 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000352068 SNX15-002 65027538-65039792 protein_coding
  ENST00000377244 SNX15-001 65027408-65040572 protein_coding
  ENST00000524831 SNX15-006 65027487-65035611 protein_coding
  ENST00000525648 SNX15-007 65027548-65035124 protein_coding
  ENST00000526702 SNX15-003 65027540-65040570 retained_intron
  ENST00000529673 SNX15-005 65027472-65035125 nonsense_mediated_decay
  ENST00000534637 SNX15-004 65027486-65035663 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000377244ENST00000526702
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000377244 10.210±0.00 0.991±0.00 5.043±2.60 13.218±0.00 1.117±0.00 6.693±0.00 8.894±8.21 2.664±0.50 3.874±2.52 12.171±0.00 14.033±10.16 10.597±2.40
ENST00000526702 N/A 0.238±0.00 N/A 0.318±0.00 N/A N/A N/A N/A 0.429±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0005829 NAS cytosol
GO:0006886 NAS intracellular protein transport
GO:0016020 NAS membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020397 snx15 sorting nexin 15 protein_coding Danio_rerio
ENSMUSG00000024787 Snx15 sorting nexin 15 protein_coding Mus_musculus

Loading