C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sorting nexin 15
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024787 Snx15 10090 - 19:6119399-6128304 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000025702 Snx15-001 6119399-6128304 protein_coding
  ENSMUST00000124171 Snx15-007 6120632-6121642 retained_intron
  ENSMUST00000124964 Snx15-003 6120632-6127807 processed_transcript
  ENSMUST00000129076 Snx15-004 6121905-6128133 retained_intron
  ENSMUST00000138931 Snx15-006 6121927-6128165 protein_coding
  ENSMUST00000150718 Snx15-005 6121492-6122287 processed_transcript
  ENSMUST00000154601 Snx15-002 6119852-6128147 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000025702ENSMUST00000124964ENSMUST00000129076ENSMUST00000150718ENSMUST00000154601
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000025702 8.071±1.01 5.586±1.33 8.938±1.32 11.035±4.11 6.724±1.98 11.029±1.64 6.427±0.51 8.330±1.23 17.922±13.52 7.408±0.50 4.198±0.36 6.014±2.29 6.768±3.83 3.818±1.59
ENSMUST00000124964 N/A 11.209±1.47 N/A N/A 5.120±1.73 9.133±1.95 N/A 3.196±0.00 N/A 6.677±0.68 N/A 4.110±0.00 5.906±0.00 N/A
ENSMUST00000129076 7.232±0.00 N/A N/A N/A 4.829±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150718 N/A N/A N/A N/A 8.335±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000154601 N/A N/A N/A N/A 3.131±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005730 IEA nucleolus
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0015031 IEA protein transport
GO:0016020 IEA membrane
GO:0031410 IEA cytoplasmic vesicle
GO:0035091 IEA phosphatidylinositol binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000020397 snx15 sorting nexin 15 protein_coding Danio_rerio
ENSG00000110025 SNX15 sorting nexin 15 protein_coding Homo_sapiens

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