C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pseudouridylate synthase 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110060 PUS3 9606 - 11:125893485-125903221 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000227474 PUS3-201 125893486-125903221 protein_coding
  ENST00000529801 PUS3-003 125895970-125903221 protein_coding
  ENST00000530811 PUS3-001 125893485-125896330 protein_coding
  ENST00000534158 PUS3-002 125895661-125903221 protein_coding
  ENST00000613398 PUS3-202 125893486-125903221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000227474ENST00000530811ENST00000534158ENST00000613398
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000227474 N/A N/A N/A N/A N/A N/A 1.056±0.00 1.019±0.00 N/A N/A N/A 2.964±0.46 2.972±0.00 2.992±1.42
ENST00000530811 N/A 1.078±0.00 N/A 1.532±0.00 0.429±0.00 2.500±0.00 0.385±0.00 1.009±0.22 2.635±1.75 2.427±0.41 4.018±0.00 1.909±0.83 1.105±0.10 N/A
ENST00000534158 2.251±0.00 1.681±0.00 1.483±0.00 2.322±0.00 1.856±0.00 1.243±0.00 1.031±0.00 N/A 0.698±0.00 N/A N/A N/A N/A 3.325±0.00
ENST00000613398 3.104±0.00 1.702±0.00 N/A 1.905±0.00 2.121±0.00 2.369±0.99 0.790±0.00 2.553±1.52 7.081±0.00 0.735±0.00 1.042±0.00 4.256±2.63 1.312±0.26 3.286±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0005634 IEA nucleus
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity
GO:0031119 IEA tRNA pseudouridine synthesis

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000028976 pus3 pseudouridylate synthase 3 protein_coding Danio_rerio
ENSMUSG00000032103 Pus3 pseudouridine synthase 3 protein_coding Mus_musculus

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