C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: pseudouridylate synthase 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613398 PUS3-202 ENSG00000110060 9606 - 11:125893486-125903221 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000613398
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000613398 3.104±0.00 1.702±0.00 1.905±0.00 2.121±0.00 2.369±0.99 0.790±0.00 2.553±1.52 7.081±0.00 0.735±0.00 1.042±0.00 4.256±2.63 1.312±0.26 3.286±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W7 CIL_0007W7_0001 VISTA 11:125757160-126360423

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001522 IEA pseudouridine synthesis
GO:0003723 IEA RNA binding
GO:0009451 IEA RNA modification
GO:0009982 IEA pseudouridine synthase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034615 Pus3-001 protein_coding Mus_musculus 0 1164
ENSMUST00000135768 Pus3-002 retained_intron Mus_musculus 0 1164
ENSMUST00000132547 Hyls1-002 retained_intron Mus_musculus 0 691
ENSMUST00000121246 Pus3-003 protein_coding Mus_musculus 0 691

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