C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: carnitine palmitoyltransferase 1A (liver)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000110090 CPT1A 9606 - 11:68754620-68844410 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000265641 CPT1A-006 68754889-68841916 protein_coding
  ENST00000376618 CPT1A-201 68754622-68841931 protein_coding
  ENST00000537756 CPT1A-005 68762627-68773887 processed_transcript
  ENST00000538994 CPT1A-004 68785744-68799268 protein_coding
  ENST00000539743 CPT1A-002 68757613-68815503 protein_coding
  ENST00000540367 CPT1A-001 68754620-68815503 protein_coding
  ENST00000561996 CPT1A-007 68812438-68844410 protein_coding
  ENST00000565318 CPT1A-009 68807516-68818692 protein_coding
  ENST00000569129 CPT1A-008 68807567-68839684 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265641ENST00000539743
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265641 23.385±0.00 19.263±0.00 0.700±0.00 6.122±0.00 5.757±4.25 15.972±11.88 7.032±6.19 43.754±0.00 10.184±8.86 9.894±0.00 1.455±1.11 11.407±6.38 9.896±0.45 8.619±2.61
ENST00000539743 N/A N/A 7.076±0.00 2.378±0.48 11.842±0.00 13.508±0.00 1.789±0.00 6.047±0.00 2.221±0.00 6.037±0.00 1.446±0.00 10.152±2.61 12.955±0.00 4.641±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004095 IDA carnitine O-palmitoyltransferase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0005743 IEA mitochondrial inner membrane
GO:0006006 IEA glucose metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006641 IEA triglyceride metabolic process
GO:0006853 TAS carnitine shuttle
GO:0008152 IEA metabolic process
GO:0009437 IDA carnitine metabolic process
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0030855 IEP epithelial cell differentiation
GO:0031307 ISS integral component of mitochondrial outer membrane
GO:0032000 IEA positive regulation of fatty acid beta-oxidation
GO:0042493 IEA response to drug
GO:0042755 IEA eating behavior
GO:0042802 IEA identical protein binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046320 IEA regulation of fatty acid oxidation
GO:0050796 IEA regulation of insulin secretion
GO:0051260 IEA protein homooligomerization
GO:0071398 IEA cellular response to fatty acid

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000059770 cpt1a carnitine palmitoyltransferase 1A (liver) protein_coding Danio_rerio
ENSDARG00000062054 CPT1A (2 of 2) carnitine palmitoyltransferase 1A (liver) protein_coding Danio_rerio
ENSMUSG00000024900 Cpt1a carnitine palmitoyltransferase 1a, liver protein_coding Mus_musculus

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