C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: carnitine palmitoyltransferase 1A (liver)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000265641 CPT1A-006 ENSG00000110090 9606 - 11:68754889-68841916 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000265641
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000265641 23.385±0.00 19.263±0.00 0.700±0.00 6.122±0.00 5.757±4.25 15.972±11.88 7.032±6.19 43.754±0.00 10.184±8.86 9.894±0.00 1.455±1.11 11.407±6.38 9.896±0.45 8.619±2.61

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001676 IDA long-chain fatty acid metabolic process
GO:0004095 IDA carnitine O-palmitoyltransferase activity
GO:0005515 IEA protein binding
GO:0005739 IDA mitochondrion
GO:0005741 TAS mitochondrial outer membrane
GO:0005743 IEA mitochondrial inner membrane
GO:0006006 IEA glucose metabolic process
GO:0006635 IEA fatty acid beta-oxidation
GO:0006641 IEA triglyceride metabolic process
GO:0006853 TAS carnitine shuttle
GO:0009437 IDA carnitine metabolic process
GO:0014070 IEA response to organic cyclic compound
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016746 IEA transferase activity, transferring acyl groups
GO:0030855 IEP epithelial cell differentiation
GO:0031307 ISS integral component of mitochondrial outer membrane
GO:0032000 IEA positive regulation of fatty acid beta-oxidation
GO:0042493 IEA response to drug
GO:0042755 IEA eating behavior
GO:0042802 IEA identical protein binding
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0044255 TAS cellular lipid metabolic process
GO:0044281 TAS small molecule metabolic process
GO:0046320 IEA regulation of fatty acid oxidation
GO:0050796 IEA regulation of insulin secretion
GO:0051260 IEA protein homooligomerization
GO:0071398 IEA cellular response to fatty acid

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000109313 Cpt1b-001 protein_coding Mus_musculus 0 211
ENSMUST00000052315 Chkb-002 retained_intron Mus_musculus 1e-18 100
ENSMUST00000165419 Cpt1b-003 retained_intron Mus_musculus 0.0000000000004 82
ENSMUST00000123555 Parp3-004 protein_coding Mus_musculus 0.000000003 69
ENSMUST00000067218 Parp3-001 protein_coding Mus_musculus 0.000000003 69
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.00000001 68
ENSMUST00000148884 Blzf1-004 retained_intron Mus_musculus 0.000007 58

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