C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: germ cell associated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432710 GSG1-002 ENSG00000111305 9606 - 12:13084823-13103645 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaTestisENST00000432710
Transcript ID Brain Placenta Testis
ENST00000432710 0.144±0.00 0.066±0.00 46.776±7.56

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DR CIL_0000DR_0001 CGP 12:12974864-13142521
CIL_0003H8 CIL_0003H8_0001 CGP 12:13044284-13142521

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005783 IEA endoplasmic reticulum
GO:0016021 IEA integral component of membrane
GO:0070063 IEA RNA polymerase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000111909 Gsg1-003 protein_coding Mus_musculus 0 926
ENSMUST00000111910 Gsg1-004 protein_coding Mus_musculus 0 468
ENSMUST00000111911 Gsg1-001 protein_coding Mus_musculus 0 418
ENSMUST00000087729 Gsg1-002 protein_coding Mus_musculus 0 418
ENSMUST00000111916 8430419L09Rik-002 protein_coding Mus_musculus 0 326

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