C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cullin-associated and neddylation-dissociated 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111530 CAND1 9606 + 12:67269281-67319951 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000535146 CAND1-008 67294955-67297848 retained_intron
  ENST00000539109 CAND1-009 67269718-67270795 processed_transcript
  ENST00000539434 CAND1-006 67269726-67293189 retained_intron
  ENST00000540319 CAND1-002 67295020-67311381 nonsense_mediated_decay
  ENST00000540525 CAND1-007 67269901-67292644 protein_coding
  ENST00000541058 CAND1-005 67269390-67282176 retained_intron
  ENST00000544619 CAND1-003 67298972-67314608 protein_coding
  ENST00000545606 CAND1-001 67269281-67319951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000540319ENST00000544619ENST00000545606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000540319 N/A 2.101±0.00 N/A N/A 2.629±0.00 N/A 1.103±0.00 2.168±0.00 N/A N/A N/A N/A N/A N/A
ENST00000544619 7.300±0.00 6.151±0.00 2.328±0.00 6.841±0.75 7.042±0.28 5.590±1.92 1.750±0.22 7.628±2.63 4.183±0.01 4.683±0.36 1.067±0.46 7.674±1.43 5.641±0.18 14.174±3.02
ENST00000545606 1.854±0.00 1.174±0.00 0.837±0.00 4.118±0.28 1.843±0.13 1.630±0.73 0.580±0.03 2.302±0.78 1.233±0.24 0.832±0.08 0.622±0.09 2.534±0.52 1.496±0.38 3.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KS CIL_0002KS_0002 CGP 12:66347431-67319951

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0010265 IDA SCF complex assembly
GO:0016020 IDA membrane
GO:0016567 IDA protein ubiquitination
GO:0017025 IEA TBP-class protein binding
GO:0030154 IDA cell differentiation
GO:0031461 IDA cullin-RING ubiquitin ligase complex
GO:0043086 IDA negative regulation of catalytic activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045899 IEA positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017841 cand1 cullin-associated and neddylation-dissociated 1 protein_coding Danio_rerio
ENSMUSG00000020114 Cand1 cullin associated and neddylation disassociated 1 protein_coding Mus_musculus

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