C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin-associated and neddylation-dissociated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000545606 CAND1-001 ENSG00000111530 9606 + 12:67269281-67319951 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000545606
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000545606 1.854±0.00 1.174±0.00 0.837±0.00 4.118±0.28 1.843±0.13 1.630±0.73 0.580±0.03 2.302±0.78 1.233±0.24 0.832±0.08 0.622±0.09 2.534±0.52 1.496±0.38 3.598±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KS CIL_0002KS_0002 CGP 12:66347431-67319951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0005488 IEA binding
GO:0005515 IPI:IEA protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0010265 IDA SCF complex assembly
GO:0016020 IDA membrane
GO:0016567 IDA protein ubiquitination
GO:0017025 IEA TBP-class protein binding
GO:0030154 IDA cell differentiation
GO:0031461 IDA cullin-RING ubiquitin ligase complex
GO:0043086 IDA negative regulation of catalytic activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045899 IEA positive regulation of RNA polymerase II transcriptional preinitiation complex assembly
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020315 Cand1-001 protein_coding Mus_musculus 0 5258
ENSMUST00000126373 Cand1-002 protein_coding Mus_musculus 0 828
ENSMUST00000149155 Cand1-003 retained_intron Mus_musculus 0 614
ENSMUST00000148802 Cand1-004 retained_intron Mus_musculus 0 411

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