C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin-associated and neddylation-dissociated 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000544619 CAND1-003 ENSG00000111530 9606 + 12:67298972-67314608 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000544619
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000544619 7.300±0.00 6.151±0.00 2.328±0.00 6.841±0.75 7.042±0.28 5.590±1.92 1.750±0.22 7.628±2.63 4.183±0.01 4.683±0.36 1.067±0.46 7.674±1.43 5.641±0.18 14.174±3.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KS CIL_0002KS_0002 CGP 12:66347431-67319951

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000151 IDA ubiquitin ligase complex
GO:0005488 IEA binding
GO:0005515 IPI protein binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0010265 IDA SCF complex assembly
GO:0016020 IDA membrane
GO:0016567 IDA protein ubiquitination
GO:0030154 IDA cell differentiation
GO:0031461 IDA cullin-RING ubiquitin ligase complex
GO:0043086 IDA negative regulation of catalytic activity
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000020315 Cand1-001 protein_coding Mus_musculus 0 2850
ENSMUST00000148802 Cand1-004 retained_intron Mus_musculus 0 411

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