C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: dermatan sulfate epimerase
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000111817 DSE 9606 + 6:116254173-116441261 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000331677 DSE-002 116370358-116441261 protein_coding
  ENST00000359564 DSE-201 116370947-116438277 protein_coding
  ENST00000430252 DSE-005 116254173-116426589 protein_coding
  ENST00000452085 DSE-003 116280120-116441261 protein_coding
  ENST00000606265 DSE-007 116412465-116426726 processed_transcript
  ENST00000606712 DSE-006 116432529-116438277 retained_intron
  ENST00000607094 DSE-004 116279143-116401272 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000331677ENST00000359564ENST00000606712
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000331677 1.916±0.00 N/A 1.474±0.00 1.171±0.00 N/A N/A N/A 1.268±0.00 N/A N/A N/A N/A
ENST00000359564 13.837±0.00 7.062±0.00 5.719±2.65 5.291±3.41 2.400±1.20 4.327±2.22 3.250±1.65 7.075±3.07 1.424±0.00 9.102±3.03 7.812±1.56 5.717±1.80
ENST00000606712 N/A N/A 2.774±0.00 N/A N/A N/A N/A 3.296±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005XK CIL_0005XK_0001 CGP 6:116254173-116441261

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000139 TAS Golgi membrane
GO:0005783 IDA endoplasmic reticulum
GO:0005794 IDA Golgi apparatus
GO:0005975 TAS carbohydrate metabolic process
GO:0015012 IEA heparan sulfate proteoglycan biosynthetic process
GO:0016021 IEA integral component of membrane
GO:0030203 TAS glycosaminoglycan metabolic process
GO:0030204 TAS chondroitin sulfate metabolic process
GO:0030206 IEA chondroitin sulfate biosynthetic process
GO:0030208 IDA dermatan sulfate biosynthetic process
GO:0044281 TAS small molecule metabolic process
GO:0047757 IDA chondroitin-glucuronate 5-epimerase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000017988 dse dermatan sulfate epimerase protein_coding Danio_rerio
ENSMUSG00000039497 Dse dermatan sulfate epimerase protein_coding Mus_musculus

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